Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AL591416.1-201ENST00000404015 867 ntBASIC2.36□□□□□ -2.03
COL4A2P08572 MTATP6P11-201ENST00000428071 670 ntBASIC2.36□□□□□ -2.03
COL4A2P08572 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.36□□□□□ -2.03
COL4A2P08572 MED6P1-201ENST00000439659 713 ntBASIC2.36□□□□□ -2.03
COL4A2P08572 RPL7P12-201ENST00000446719 750 ntBASIC2.36□□□□□ -2.03
COL4A2P08572 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.36□□□□□ -2.03
COL4A2P08572 AC111193.1-201ENST00000504097 155 ntBASIC2.36□□□□□ -2.03
COL4A2P08572 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.36□□□□□ -2.03
COL4A2P08572 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.36□□□□□ -2.03
COL4A2P08572 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.36□□□□□ -2.03
COL4A2P08572 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.36□□□□□ -2.03
COL4A2P08572 RANP3-201ENST00000530970 276 ntBASIC2.36□□□□□ -2.03
COL4A2P08572 SUMO2P14-201ENST00000604488 293 ntBASIC2.36□□□□□ -2.03
COL4A2P08572 MIR6845-201ENST00000613182 61 ntBASIC2.36□□□□□ -2.03
COL4A2P08572 AL136981.2-201ENST00000617319 734 ntBASIC2.36□□□□□ -2.03
COL4A2P08572 MIR6873-201ENST00000622788 63 ntBASIC2.36□□□□□ -2.03
COL4A2P08572 PNPT1P2-201ENST00000456768 2050 ntBASIC2.36□□□□□ -2.03
COL4A2P08572 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
COL4A2P08572 CUL1P1-201ENST00000509510 2425 ntBASIC2.36□□□□□ -2.03
COL4A2P08572 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.35□□□□□ -2.03
COL4A2P08572 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL4A2P08572 AC097714.1-201ENST00000511272 1647 ntBASIC2.35□□□□□ -2.03
COL4A2P08572 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.35□□□□□ -2.03
COL4A2P08572 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.35□□□□□ -2.03
COL4A2P08572 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
COL4A2P08572 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
COL4A2P08572 AC009501.3-201ENST00000605001 1352 ntBASIC2.35□□□□□ -2.03
COL4A2P08572 MTND2P21-201ENST00000436242 1042 ntBASIC2.35□□□□□ -2.03
COL4A2P08572 HMGB1P18-201ENST00000438801 619 ntBASIC2.35□□□□□ -2.03
COL4A2P08572 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.35□□□□□ -2.03
COL4A2P08572 MTND2P8-201ENST00000450555 1025 ntBASIC2.35□□□□□ -2.03
COL4A2P08572 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.35□□□□□ -2.03
COL4A2P08572 AL024509.2-201ENST00000493462 493 ntBASIC2.35□□□□□ -2.03
COL4A2P08572 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.35□□□□□ -2.03
COL4A2P08572 AC108157.1-201ENST00000510511 539 ntBASIC2.35□□□□□ -2.03
COL4A2P08572 Y_RNA.676-201ENST00000516393 96 ntBASIC2.35□□□□□ -2.03
COL4A2P08572 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.35□□□□□ -2.03
COL4A2P08572 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.35□□□□□ -2.03
COL4A2P08572 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.35□□□□□ -2.03
COL4A2P08572 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.35□□□□□ -2.03
COL4A2P08572 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.35□□□□□ -2.03
COL4A2P08572 MIR5007-201ENST00000583098 95 ntBASIC2.35□□□□□ -2.03
COL4A2P08572 AC023043.3-201ENST00000593113 385 ntBASIC2.35□□□□□ -2.03
COL4A2P08572 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.35□□□□□ -2.03
COL4A2P08572 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.35□□□□□ -2.03
COL4A2P08572 AC103710.2-201ENST00000609912 942 ntBASIC2.35□□□□□ -2.03
COL4A2P08572 AC116563.2-201ENST00000624751 535 ntBASIC2.35□□□□□ -2.03
COL4A2P08572 AL133412.1-201ENST00000380194 2992 ntBASIC2.35□□□□□ -2.03
COL4A2P08572 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL4A2P08572 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
COL4A2P08572 SNORD21-201ENST00000383953 95 ntBASIC2.34□□□□□ -2.03
COL4A2P08572 RPL31P52-201ENST00000407532 367 ntBASIC2.34□□□□□ -2.03
COL4A2P08572 FO393419.3-201ENST00000428741 282 ntBASIC2.34□□□□□ -2.03
COL4A2P08572 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.34□□□□□ -2.03
COL4A2P08572 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
COL4A2P08572 RPL7P31-201ENST00000450192 724 ntBASIC2.34□□□□□ -2.03
COL4A2P08572 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.34□□□□□ -2.03
COL4A2P08572 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.34□□□□□ -2.03
COL4A2P08572 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.34□□□□□ -2.03
COL4A2P08572 AC107222.1-201ENST00000510899 637 ntBASIC2.34□□□□□ -2.03
COL4A2P08572 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.34□□□□□ -2.03
COL4A2P08572 SNORA48.9-201ENST00000516419 162 ntBASIC2.34□□□□□ -2.03
COL4A2P08572 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.34□□□□□ -2.03
COL4A2P08572 TRAV11-201ENST00000539512 339 ntBASIC2.34□□□□□ -2.03
COL4A2P08572 AC023158.1-201ENST00000561632 1025 ntBASIC2.34□□□□□ -2.03
COL4A2P08572 MTND4LP24-201ENST00000572277 291 ntBASIC2.34□□□□□ -2.03
COL4A2P08572 ZNF92P3-201ENST00000596594 954 ntBASIC2.34□□□□□ -2.03
COL4A2P08572 AC110792.4-201ENST00000609843 298 ntBASIC2.34□□□□□ -2.03
COL4A2P08572 MIR7973-1-201ENST00000614683 76 ntBASIC2.34□□□□□ -2.03
COL4A2P08572 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.34□□□□□ -2.03
COL4A2P08572 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.34□□□□□ -2.03
COL4A2P08572 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
COL4A2P08572 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
COL4A2P08572 AL118496.1-201ENST00000440201 1812 ntBASIC2.34□□□□□ -2.03
COL4A2P08572 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
COL4A2P08572 MIR6073-201ENST00000352083 89 ntBASIC2.34□□□□□ -2.04
COL4A2P08572 SNORA27.3-201ENST00000364937 134 ntBASIC2.34□□□□□ -2.04
COL4A2P08572 SNORD6-201ENST00000365444 73 ntBASIC2.34□□□□□ -2.04
COL4A2P08572 SNORA64-201ENST00000384674 134 ntBASIC2.34□□□□□ -2.04
COL4A2P08572 RN7SKP32-201ENST00000410167 303 ntBASIC2.34□□□□□ -2.04
COL4A2P08572 MTCO2P17-201ENST00000424336 677 ntBASIC2.34□□□□□ -2.04
COL4A2P08572 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
COL4A2P08572 ELOCP11-201ENST00000436690 332 ntBASIC2.34□□□□□ -2.04
COL4A2P08572 ELOCP16-201ENST00000444494 332 ntBASIC2.34□□□□□ -2.04
COL4A2P08572 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.34□□□□□ -2.04
COL4A2P08572 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.34□□□□□ -2.04
COL4A2P08572 MTCYBP20-201ENST00000524239 1129 ntBASIC2.34□□□□□ -2.04
COL4A2P08572 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.34□□□□□ -2.04
COL4A2P08572 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.34□□□□□ -2.04
COL4A2P08572 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.34□□□□□ -2.04
COL4A2P08572 NF1P5-201ENST00000588287 448 ntBASIC2.34□□□□□ -2.04
COL4A2P08572 AC067747.1-201ENST00000608026 250 ntBASIC2.34□□□□□ -2.04
COL4A2P08572 CR589904.2-201ENST00000612533 440 ntBASIC2.34□□□□□ -2.04
COL4A2P08572 AC103798.2-201ENST00000624292 632 ntBASIC2.34□□□□□ -2.04
COL4A2P08572 PISRT1-201ENST00000626175 531 ntBASIC2.34□□□□□ -2.04
COL4A2P08572 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.04
COL4A2P08572 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL4A2P08572 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.33□□□□□ -2.04
COL4A2P08572 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.33□□□□□ -2.04
COL4A2P08572 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms