Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 RPL21P93-201ENST00000480465 489 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AC233702.1-201ENST00000482905 502 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AC087190.1-201ENST00000484462 480 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AC093591.1-201ENST00000491435 481 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 RPL21P129-201ENST00000491732 478 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 RPL21P16-201ENST00000495531 483 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AC091860.1-201ENST00000505723 432 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.61□□□□□ -1.99
MT-ND4P03905 AC004062.1-201ENST00000509926 645 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.61□□□□□ -1.99
MT-ND4P03905 RNU6-885P-201ENST00000516607 104 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
MT-ND4P03905 LSM6P2-201ENST00000552208 177 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.61□□□□□ -1.99
MT-ND4P03905 ZNF971P-201ENST00000562068 1249 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AC087481.2-201ENST00000565492 330 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.61□□□□□ -1.99
MT-ND4P03905 COX6CP3-201ENST00000580869 223 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 MIR3158-1-201ENST00000583596 81 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.61□□□□□ -1.99
MT-ND4P03905 CCDC58P3-201ENST00000590792 430 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.61□□□□□ -1.99
MT-ND4P03905 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.61□□□□□ -1.99
MT-ND4P03905 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.61□□□□□ -1.99
MT-ND4P03905 AC002076.2-201ENST00000617362 122 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.61□□□□□ -1.99
MT-ND4P03905 AC006249.1-201ENST00000621223 471 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 AP003122.6-201ENST00000623831 495 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.61□□□□□ -1.99
MT-ND4P03905 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.61□□□□□ -1.99
MT-ND4P03905 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
MT-ND4P03905 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.61□□□□□ -1.99
MT-ND4P03905 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
MT-ND4P03905 AC111188.2-201ENST00000529697 1387 ntBASIC2.61□□□□□ -1.99
MT-ND4P03905 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
MT-ND4P03905 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
MT-ND4P03905 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
MT-ND4P03905 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.6□□□□□ -1.99
MT-ND4P03905 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.6□□□□□ -1.99
MT-ND4P03905 RNU6-582P-201ENST00000362989 107 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 RNU6-549P-201ENST00000384433 107 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
MT-ND4P03905 AL357075.1-201ENST00000404107 726 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.6□□□□□ -1.99
MT-ND4P03905 AC092638.1-201ENST00000411966 1275 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.6□□□□□ -1.99
MT-ND4P03905 AC019070.1-201ENST00000415008 1024 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 FCF1P2-201ENST00000415284 583 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.6□□□□□ -1.99
MT-ND4P03905 RAD23BP2-201ENST00000416003 1207 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 RPS6P14-201ENST00000425165 719 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
MT-ND4P03905 SAR1AP4-201ENST00000429225 591 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 UBE2V1P6-201ENST00000430840 422 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 AC005345.1-201ENST00000431868 217 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 MUPP-201ENST00000438111 566 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 RPS29P6-201ENST00000438196 145 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 GSTA11P-201ENST00000452866 669 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.6□□□□□ -1.99
MT-ND4P03905 PABPC1P3-201ENST00000469174 459 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.6□□□□□ -1.99
MT-ND4P03905 AC105914.1-201ENST00000511798 226 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 GMPSP1-201ENST00000514075 579 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.6□□□□□ -1.99
MT-ND4P03905 SNORA67.7-201ENST00000516664 135 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.6□□□□□ -1.99
MT-ND4P03905 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.6□□□□□ -1.99
MT-ND4P03905 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
MT-ND4P03905 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.6□□□□□ -1.99
MT-ND4P03905 AL136520.1-202ENST00000555494 763 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.6□□□□□ -1.99
MT-ND4P03905 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.6□□□□□ -1.99
MT-ND4P03905 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.6□□□□□ -1.99
MT-ND4P03905 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.6□□□□□ -1.99
MT-ND4P03905 AC091057.2-201ENST00000602594 792 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 GAS5-AS1-201ENST00000602767 694 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 DPRXP5-201ENST00000604662 539 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 AC100793.4-201ENST00000613683 429 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 AC138932.5-201ENST00000617759 563 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 AC018755.4-201ENST00000619715 454 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.6□□□□□ -1.99
MT-ND4P03905 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.6□□□□□ -1.99
MT-ND4P03905 MTND2P41-201ENST00000637599 773 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.6□□□□□ -1.99
MT-ND4P03905 AC009487.2-201ENST00000420969 6821 ntBASIC2.6□□□□□ -1.99
MT-ND4P03905 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
MT-ND4P03905 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
MT-ND4P03905 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.59□□□□□ -1.99
MT-ND4P03905 MTCO1P12-201ENST00000414273 1543 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.59□□□□□ -1.99
MT-ND4P03905 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
MT-ND4P03905 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
MT-ND4P03905 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
MT-ND4P03905 RNU6-468P-201ENST00000384003 109 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 SNORD15B-201ENST00000384714 146 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 MIR449B-201ENST00000384995 97 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 AL023807.1-201ENST00000407932 359 ntBASIC2.59□□□□□ -1.99
MT-ND4P03905 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.59□□□□□ -1.99
MT-ND4P03905 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.59□□□□□ -1.99
MT-ND4P03905 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms