Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC244098.2-201ENST00000422068 99 ntBASIC3□□□□□ -1.93
CTDNEP1O95476 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3□□□□□ -1.93
CTDNEP1O95476 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3□□□□□ -1.93
CTDNEP1O95476 AP000936.2-201ENST00000447151 681 ntBASIC3□□□□□ -1.93
CTDNEP1O95476 AC008280.2-201ENST00000455473 307 ntBASIC3□□□□□ -1.93
CTDNEP1O95476 SNORD109B-201ENST00000458961 67 ntBASIC3□□□□□ -1.93
CTDNEP1O95476 SNORD109A-201ENST00000459128 67 ntBASIC3□□□□□ -1.93
CTDNEP1O95476 RPL7P5-201ENST00000471472 736 ntBASIC3□□□□□ -1.93
CTDNEP1O95476 AC096576.1-201ENST00000489014 359 ntBASIC3□□□□□ -1.93
CTDNEP1O95476 RPL23AP55-201ENST00000498163 452 ntBASIC3□□□□□ -1.93
CTDNEP1O95476 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3□□□□□ -1.93
CTDNEP1O95476 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3□□□□□ -1.93
CTDNEP1O95476 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
CTDNEP1O95476 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3□□□□□ -1.93
CTDNEP1O95476 OR4H12P-201ENST00000556269 907 ntBASIC3□□□□□ -1.93
CTDNEP1O95476 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3□□□□□ -1.93
CTDNEP1O95476 MTCO3P13-201ENST00000577757 781 ntBASIC3□□□□□ -1.93
CTDNEP1O95476 ELOCP29-201ENST00000588193 334 ntBASIC3□□□□□ -1.93
CTDNEP1O95476 AC120053.1-201ENST00000607706 736 ntBASIC3□□□□□ -1.93
CTDNEP1O95476 BX664608.1-201ENST00000610519 487 ntBASIC3□□□□□ -1.93
CTDNEP1O95476 AL359535.1-201ENST00000612100 1087 ntBASIC3□□□□□ -1.93
CTDNEP1O95476 FRG1HP-204ENST00000617940 757 ntBASIC3□□□□□ -1.93
CTDNEP1O95476 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3□□□□□ -1.93
CTDNEP1O95476 EFTUD1P2-201ENST00000514817 1603 ntBASIC3□□□□□ -1.93
CTDNEP1O95476 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CTDNEP1O95476 CUL1P1-201ENST00000509510 2425 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CTDNEP1O95476 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CTDNEP1O95476 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CTDNEP1O95476 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 RNU1-100P-201ENST00000365255 165 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 RNU6-1293P-201ENST00000384077 107 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 RNU6-1176P-201ENST00000390955 107 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 BTBD10P2-201ENST00000404779 676 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 MTATP6P31-201ENST00000406985 692 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 MIR1303-201ENST00000408625 86 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CTDNEP1O95476 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CTDNEP1O95476 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 HMGB1P48-201ENST00000446155 598 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 RPL7P59-201ENST00000447700 943 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 HMGN1P5-201ENST00000448591 263 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 snoU13.7-201ENST00000459220 104 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 AC091179.1-201ENST00000461606 579 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 AC104689.1-201ENST00000473356 768 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 AC006483.1-201ENST00000487308 313 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 NAMPTP2-201ENST00000505629 1115 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 AC128657.1-201ENST00000549459 145 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 AL160237.3-201ENST00000604114 1013 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 AC007619.2-201ENST00000605743 379 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 HMGN2P28-201ENST00000606102 262 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 AL136370.1-201ENST00000608166 691 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 AC016542.1-201ENST00000608259 493 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CTDNEP1O95476 RNU6-156P-201ENST00000621869 107 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 AC103798.2-201ENST00000624292 632 ntBASIC2.99□□□□□ -1.93
CTDNEP1O95476 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.99□□□□□ -1.93
CTDNEP1O95476 NSRP1P1-201ENST00000444067 1693 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.98□□□□□ -1.93
CTDNEP1O95476 MTND5P7-201ENST00000413558 1798 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CTDNEP1O95476 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CTDNEP1O95476 RNA5SP27-201ENST00000363839 119 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.98□□□□□ -1.93
CTDNEP1O95476 MIR34A-201ENST00000385130 110 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.98□□□□□ -1.93
CTDNEP1O95476 RNU2-71P-201ENST00000411395 189 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 AC096664.2-201ENST00000411843 406 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 AL139281.1-201ENST00000422120 335 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 RPL7P46-201ENST00000425129 740 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 RPS26P30-201ENST00000443431 335 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 RPL39P40-201ENST00000445481 146 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 RPL7P52-201ENST00000449200 742 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 SSXP4-201ENST00000451349 245 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 RPL21P8-201ENST00000465083 535 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.98□□□□□ -1.93
CTDNEP1O95476 MTCO3P27-201ENST00000514397 196 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 AC112206.4-201ENST00000515142 405 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 AC026801.2-201ENST00000515352 425 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.98□□□□□ -1.93
CTDNEP1O95476 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.98□□□□□ -1.93
CTDNEP1O95476 AC083923.1-201ENST00000523708 376 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.98□□□□□ -1.93
CTDNEP1O95476 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms