Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC025881.1-201ENST00000518851 512 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 IGHV3-32-201ENST00000519182 355 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 AC060788.1-201ENST00000521318 469 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.69□□□□□ -1.82
NKX2-2O95096 AC109635.4-202ENST00000531666 412 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.69□□□□□ -1.82
NKX2-2O95096 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
NKX2-2O95096 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
NKX2-2O95096 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.69□□□□□ -1.82
NKX2-2O95096 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-2O95096 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.69□□□□□ -1.82
NKX2-2O95096 NBR2-204ENST00000587322 63 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 AC012065.4-201ENST00000602445 679 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.69□□□□□ -1.82
NKX2-2O95096 MIR6867-201ENST00000610636 67 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 TUG1_1.1-201ENST00000610654 145 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 AC083809.1-201ENST00000615051 472 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NKX2-2O95096 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-2O95096 MAPK10-253ENST00000641010 4072 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-2O95096 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-2O95096 AC016588.2-201ENST00000632484 3021 ntBASIC3.69□□□□□ -1.82
NKX2-2O95096 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-2O95096 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX2-2O95096 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX2-2O95096 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-2O95096 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-2O95096 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-2O95096 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-2O95096 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-2O95096 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-2O95096 IPO8P1-201ENST00000455509 3109 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 RNU4-91P-201ENST00000364778 135 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 SNORD3H-201ENST00000384486 214 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 MIR135A2-201ENST00000384854 100 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 AL049693.1-201ENST00000402760 611 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 MTCYBP36-201ENST00000404146 440 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 AL359704.1-201ENST00000411586 781 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 C4BPAP2-201ENST00000428434 478 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 ATP5HP2-201ENST00000433885 485 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 UBE2V1P13-201ENST00000436983 439 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX2-2O95096 HMGB1P37-201ENST00000439613 609 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 COX6CP12-201ENST00000446748 202 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX2-2O95096 RPL5P32-201ENST00000454085 879 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 UBDP1-202ENST00000457888 382 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 RPL23AP2-201ENST00000471227 466 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 AC110792.1-201ENST00000491826 472 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 RPL7P24-201ENST00000493052 752 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX2-2O95096 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX2-2O95096 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX2-2O95096 AC116347.2-201ENST00000514912 523 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.68□□□□□ -1.82
NKX2-2O95096 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX2-2O95096 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX2-2O95096 AP004242.1-201ENST00000533701 349 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX2-2O95096 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX2-2O95096 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX2-2O95096 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX2-2O95096 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX2-2O95096 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX2-2O95096 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX2-2O95096 SNORD84-203ENST00000584275 78 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX2-2O95096 TPMTP1-201ENST00000592307 737 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX2-2O95096 AP001981.2-201ENST00000603241 418 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 AL358072.1-201ENST00000604156 575 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 AL590392.1-201ENST00000604960 446 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 AL590282.1-201ENST00000610379 1136 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 AC023043.4-201ENST00000612081 449 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 AC015967.1-201ENST00000619893 476 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 MIR4727-201ENST00000622232 55 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NKX2-2O95096 AC112484.5-201ENST00000624189 228 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 AC079597.1-201ENST00000624306 508 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 AC112200.1-201ENST00000625015 234 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-2O95096 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NKX2-2O95096 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX2-2O95096 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX2-2O95096 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-2O95096 AC021755.1-201ENST00000559747 1447 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-2O95096 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX2-2O95096 LINC02471-203ENST00000641941 4752 ntBASIC3.68□□□□□ -1.82
NKX2-2O95096 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.68□□□□□ -1.82
NKX2-2O95096 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX2-2O95096 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX2-2O95096 AC011460.1-201ENST00000636268 1834 ntBASIC3.67□□□□□ -1.82
NKX2-2O95096 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX2-2O95096 AC116096.1-201ENST00000566804 2314 ntBASIC3.67□□□□□ -1.82
NKX2-2O95096 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.67□□□□□ -1.82
NKX2-2O95096 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms