Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC024884.1-201ENST00000620583 399 ntBASIC6.53□□□□□ -1.36
RNF40O75150 AL691447.3-201ENST00000635020 330 ntBASIC6.53□□□□□ -1.36
RNF40O75150 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF40O75150 AC116667.2-201ENST00000641075 823 ntBASIC6.53□□□□□ -1.36
RNF40O75150 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF40O75150 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF40O75150 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF40O75150 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
RNF40O75150 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
RNF40O75150 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
RNF40O75150 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF40O75150 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.52□□□□□ -1.36
RNF40O75150 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
RNF40O75150 RLIMP1-201ENST00000339626 1680 ntBASIC6.52□□□□□ -1.37
RNF40O75150 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF40O75150 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF40O75150 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
RNF40O75150 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF40O75150 SAGE3P-201ENST00000619800 1635 ntBASIC6.52□□□□□ -1.37
RNF40O75150 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF40O75150 RNU6-1303P-201ENST00000364841 107 ntBASIC6.52□□□□□ -1.37
RNF40O75150 RNU6-47P-201ENST00000383866 107 ntBASIC6.52□□□□□ -1.37
RNF40O75150 Y_RNA.541-201ENST00000384640 113 ntBASIC6.52□□□□□ -1.37
RNF40O75150 SNORA11B-201ENST00000408175 129 ntBASIC6.52□□□□□ -1.37
RNF40O75150 Y_RNA.592-201ENST00000410274 109 ntBASIC6.52□□□□□ -1.37
RNF40O75150 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF40O75150 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF40O75150 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF40O75150 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF40O75150 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
RNF40O75150 NDUFB4P10-201ENST00000452541 359 ntBASIC6.52□□□□□ -1.37
RNF40O75150 PPIAP27-201ENST00000453800 265 ntBASIC6.52□□□□□ -1.37
RNF40O75150 AC022206.1-201ENST00000495947 347 ntBASIC6.52□□□□□ -1.37
RNF40O75150 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF40O75150 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF40O75150 MIR3614-201ENST00000581261 86 ntBASIC6.52□□□□□ -1.37
RNF40O75150 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF40O75150 AC072026.1-201ENST00000605023 201 ntBASIC6.52□□□□□ -1.37
RNF40O75150 MIR376A1-201ENST00000616574 68 ntBASIC6.52□□□□□ -1.37
RNF40O75150 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RNF40O75150 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF40O75150 EOGT-210ENST00000615922 1931 ntBASIC6.52□□□□□ -1.37
RNF40O75150 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF40O75150 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.52□□□□□ -1.37
RNF40O75150 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RNF40O75150 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF40O75150 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF40O75150 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF40O75150 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
RNF40O75150 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF40O75150 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
RNF40O75150 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RNF40O75150 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RNF40O75150 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF40O75150 RNA5SP510-201ENST00000364697 99 ntBASIC6.51□□□□□ -1.37
RNF40O75150 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF40O75150 RFX3-203ENST00000381984 364 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF40O75150 RPS29P13-201ENST00000402041 169 ntBASIC6.51□□□□□ -1.37
RNF40O75150 RNU6ATAC15P-201ENST00000408279 121 ntBASIC6.51□□□□□ -1.37
RNF40O75150 RN7SKP159-201ENST00000410657 292 ntBASIC6.51□□□□□ -1.37
RNF40O75150 AL030996.1-201ENST00000411430 235 ntBASIC6.51□□□□□ -1.37
RNF40O75150 AC234779.1-201ENST00000425910 285 ntBASIC6.51□□□□□ -1.37
RNF40O75150 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF40O75150 AC004866.2-201ENST00000438285 481 ntBASIC6.51□□□□□ -1.37
RNF40O75150 PTMAP6-201ENST00000439110 327 ntBASIC6.51□□□□□ -1.37
RNF40O75150 AL391987.1-201ENST00000441025 200 ntBASIC6.51□□□□□ -1.37
RNF40O75150 RPL23AP33-201ENST00000442301 452 ntBASIC6.51□□□□□ -1.37
RNF40O75150 AC008264.1-201ENST00000447612 367 ntBASIC6.51□□□□□ -1.37
RNF40O75150 TPT1P13-201ENST00000449760 499 ntBASIC6.51□□□□□ -1.37
RNF40O75150 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.51□□□□□ -1.37
RNF40O75150 RN7SL369P-201ENST00000477138 299 ntBASIC6.51□□□□□ -1.37
RNF40O75150 AC109925.1-201ENST00000478069 331 ntBASIC6.51□□□□□ -1.37
RNF40O75150 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF40O75150 OR51K1P-201ENST00000510214 950 ntBASIC6.51□□□□□ -1.37
RNF40O75150 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.51□□□□□ -1.37
RNF40O75150 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF40O75150 ERHP1-201ENST00000523006 310 ntBASIC6.51□□□□□ -1.37
RNF40O75150 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF40O75150 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF40O75150 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF40O75150 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF40O75150 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF40O75150 MIR3144-201ENST00000579460 79 ntBASIC6.51□□□□□ -1.37
RNF40O75150 AL160281.1-201ENST00000605307 311 ntBASIC6.51□□□□□ -1.37
RNF40O75150 AC007619.2-201ENST00000605743 379 ntBASIC6.51□□□□□ -1.37
RNF40O75150 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF40O75150 AL589994.2-201ENST00000621124 579 ntBASIC6.51□□□□□ -1.37
RNF40O75150 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF40O75150 MIR4302-201ENST00000638058 60 ntBASIC6.51□□□□□ -1.37
RNF40O75150 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF40O75150 AC009951.1-201ENST00000623674 2614 ntBASIC6.51□□□□□ -1.37
RNF40O75150 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF40O75150 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
RNF40O75150 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF40O75150 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF40O75150 Z95114.1-201ENST00000624264 14574 ntBASIC6.5□□□□□ -1.37
RNF40O75150 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF40O75150 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RNF40O75150 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF40O75150 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms