Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.51□□□□□ -1.85
BRD4O60885 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.51□□□□□ -1.85
BRD4O60885 AL135786.1-201ENST00000415892 214 ntBASIC3.51□□□□□ -1.85
BRD4O60885 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.51□□□□□ -1.85
BRD4O60885 PSMA2P3-201ENST00000429685 675 ntBASIC3.51□□□□□ -1.85
BRD4O60885 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
BRD4O60885 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.51□□□□□ -1.85
BRD4O60885 IFNA11P-201ENST00000446352 526 ntBASIC3.51□□□□□ -1.85
BRD4O60885 AC104058.1-201ENST00000448028 297 ntBASIC3.51□□□□□ -1.85
BRD4O60885 RPL31P53-201ENST00000457065 348 ntBASIC3.51□□□□□ -1.85
BRD4O60885 HMGB1P25-201ENST00000468402 607 ntBASIC3.51□□□□□ -1.85
BRD4O60885 RN7SL499P-201ENST00000481141 276 ntBASIC3.51□□□□□ -1.85
BRD4O60885 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
BRD4O60885 ACTR6P1-201ENST00000514311 1104 ntBASIC3.51□□□□□ -1.85
BRD4O60885 RN7SKP24-201ENST00000515888 284 ntBASIC3.51□□□□□ -1.85
BRD4O60885 SNORD59.2-201ENST00000516873 68 ntBASIC3.51□□□□□ -1.85
BRD4O60885 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.51□□□□□ -1.85
BRD4O60885 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.51□□□□□ -1.85
BRD4O60885 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.51□□□□□ -1.85
BRD4O60885 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.51□□□□□ -1.85
BRD4O60885 AC034268.2-201ENST00000571784 482 ntBASIC3.51□□□□□ -1.85
BRD4O60885 AC113194.1-201ENST00000606037 500 ntBASIC3.51□□□□□ -1.85
BRD4O60885 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.51□□□□□ -1.85
BRD4O60885 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.51□□□□□ -1.85
BRD4O60885 RNA5SP289-201ENST00000362332 137 ntBASIC3.5□□□□□ -1.85
BRD4O60885 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRD4O60885 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.5□□□□□ -1.85
BRD4O60885 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.5□□□□□ -1.85
BRD4O60885 RPL21P66-201ENST00000426566 466 ntBASIC3.5□□□□□ -1.85
BRD4O60885 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.5□□□□□ -1.85
BRD4O60885 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BRD4O60885 AL513343.1-201ENST00000451818 792 ntBASIC3.5□□□□□ -1.85
BRD4O60885 RPL23AP23-201ENST00000452590 471 ntBASIC3.5□□□□□ -1.85
BRD4O60885 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.5□□□□□ -1.85
BRD4O60885 RPS4XP6-201ENST00000477670 797 ntBASIC3.5□□□□□ -1.85
BRD4O60885 OR5AK3P-201ENST00000527486 1297 ntBASIC3.5□□□□□ -1.85
BRD4O60885 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.5□□□□□ -1.85
BRD4O60885 AC078899.3-201ENST00000599065 212 ntBASIC3.5□□□□□ -1.85
BRD4O60885 AL390240.1-201ENST00000612950 384 ntBASIC3.5□□□□□ -1.85
BRD4O60885 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BRD4O60885 AC079228.1-201ENST00000624774 1049 ntBASIC3.5□□□□□ -1.85
BRD4O60885 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRD4O60885 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BRD4O60885 API5P2-201ENST00000397055 1498 ntBASIC3.49□□□□□ -1.85
BRD4O60885 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
BRD4O60885 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
BRD4O60885 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.49□□□□□ -1.85
BRD4O60885 RNA5SP210-201ENST00000391034 120 ntBASIC3.49□□□□□ -1.85
BRD4O60885 RNA5SP425-201ENST00000410336 112 ntBASIC3.49□□□□□ -1.85
BRD4O60885 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.49□□□□□ -1.85
BRD4O60885 SAR1AP4-201ENST00000429225 591 ntBASIC3.49□□□□□ -1.85
BRD4O60885 AL356320.1-201ENST00000429616 163 ntBASIC3.49□□□□□ -1.85
BRD4O60885 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.49□□□□□ -1.85
BRD4O60885 AC108120.2-201ENST00000512973 294 ntBASIC3.49□□□□□ -1.85
BRD4O60885 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
BRD4O60885 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
BRD4O60885 AC009063.1-201ENST00000563342 702 ntBASIC3.49□□□□□ -1.85
BRD4O60885 MIR5092-201ENST00000583139 88 ntBASIC3.49□□□□□ -1.85
BRD4O60885 AC245128.3-201ENST00000594721 748 ntBASIC3.49□□□□□ -1.85
BRD4O60885 YWHAQP7-201ENST00000603536 658 ntBASIC3.49□□□□□ -1.85
BRD4O60885 FAM157B-203ENST00000639350 358 ntBASIC3.49□□□□□ -1.85
BRD4O60885 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
BRD4O60885 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
BRD4O60885 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
BRD4O60885 AL359511.1-201ENST00000402970 211 ntBASIC3.48□□□□□ -1.85
BRD4O60885 AL138880.1-201ENST00000405824 642 ntBASIC3.48□□□□□ -1.85
BRD4O60885 AC080125.1-201ENST00000414888 684 ntBASIC3.48□□□□□ -1.85
BRD4O60885 RFESDP1-201ENST00000422350 461 ntBASIC3.48□□□□□ -1.85
BRD4O60885 RPL17P49-201ENST00000443728 411 ntBASIC3.48□□□□□ -1.85
BRD4O60885 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.48□□□□□ -1.85
BRD4O60885 AC133134.1-201ENST00000466800 359 ntBASIC3.48□□□□□ -1.85
BRD4O60885 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.48□□□□□ -1.85
BRD4O60885 SNORA31.26-201ENST00000517250 137 ntBASIC3.48□□□□□ -1.85
BRD4O60885 MTCYBP41-201ENST00000528913 1123 ntBASIC3.48□□□□□ -1.85
BRD4O60885 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.48□□□□□ -1.85
BRD4O60885 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.48□□□□□ -1.85
BRD4O60885 AC012182.1-201ENST00000570133 895 ntBASIC3.48□□□□□ -1.85
BRD4O60885 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.48□□□□□ -1.85
BRD4O60885 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.48□□□□□ -1.85
BRD4O60885 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.48□□□□□ -1.85
BRD4O60885 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.48□□□□□ -1.85
BRD4O60885 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
BRD4O60885 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.47□□□□□ -1.85
BRD4O60885 MIR764-201ENST00000390811 85 ntBASIC3.47□□□□□ -1.85
BRD4O60885 RNU4-53P-201ENST00000410828 140 ntBASIC3.47□□□□□ -1.85
BRD4O60885 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.47□□□□□ -1.85
BRD4O60885 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.47□□□□□ -1.85
BRD4O60885 RPL39P40-201ENST00000445481 146 ntBASIC3.47□□□□□ -1.85
BRD4O60885 RPL23AP55-201ENST00000498163 452 ntBASIC3.47□□□□□ -1.85
BRD4O60885 AC108210.2-201ENST00000503681 201 ntBASIC3.47□□□□□ -1.85
BRD4O60885 ATG10-AS1-201ENST00000504846 648 ntBASIC3.47□□□□□ -1.85
BRD4O60885 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.47□□□□□ -1.85
BRD4O60885 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.47□□□□□ -1.85
BRD4O60885 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.47□□□□□ -1.85
BRD4O60885 MIR4648-201ENST00000580107 72 ntBASIC3.47□□□□□ -1.85
BRD4O60885 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
BRD4O60885 CRYM-AS1-204ENST00000637983 556 ntBASIC3.47□□□□□ -1.85
BRD4O60885 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
BRD4O60885 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.47□□□□□ -1.85
BRD4O60885 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms