Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AL353743.4-201ENST00000422653 1547 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.72□□□□□ -1.81
CACNA1FO60840 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CACNA1FO60840 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CACNA1FO60840 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CACNA1FO60840 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.72□□□□□ -1.81
CACNA1FO60840 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CACNA1FO60840 Y_RNA.51-201ENST00000362725 102 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 RNU6-984P-201ENST00000363236 109 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.72□□□□□ -1.81
CACNA1FO60840 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CACNA1FO60840 AL353898.1-201ENST00000444055 238 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CACNA1FO60840 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.72□□□□□ -1.81
CACNA1FO60840 PRELID3BP7-201ENST00000503606 469 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 MTCYBP37-201ENST00000510642 1133 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 AC026801.2-201ENST00000515352 425 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 RNU6-1129P-201ENST00000515964 104 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.72□□□□□ -1.81
CACNA1FO60840 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.72□□□□□ -1.81
CACNA1FO60840 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.72□□□□□ -1.81
CACNA1FO60840 OR2AS2P-201ENST00000606902 342 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 AL450489.1-201ENST00000612071 468 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 AC078899.5-201ENST00000612475 178 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 AC092608.3-201ENST00000625017 386 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.72□□□□□ -1.81
CACNA1FO60840 AC084035.1-201ENST00000634543 607 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 LINC02211-204ENST00000642024 1070 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 AC000403.1-201ENST00000613696 3585 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.72□□□□□ -1.81
CACNA1FO60840 MTND4P4-201ENST00000439033 1366 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.72□□□□□ -1.81
CACNA1FO60840 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
CACNA1FO60840 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CACNA1FO60840 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.71□□□□□ -1.82
CACNA1FO60840 RNA5SP502-201ENST00000362694 119 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 RNU4-92P-201ENST00000363783 136 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 RNU4-24P-201ENST00000364565 139 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.71□□□□□ -1.82
CACNA1FO60840 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.71□□□□□ -1.82
CACNA1FO60840 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 RWDD4P2-201ENST00000426392 563 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AC105402.2-201ENST00000438503 358 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AL357520.1-201ENST00000441557 453 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AC005410.1-202ENST00000460347 485 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 TXNP6-201ENST00000510190 310 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AC009812.2-201ENST00000517657 457 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.71□□□□□ -1.82
CACNA1FO60840 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.71□□□□□ -1.82
CACNA1FO60840 MTND2P26-201ENST00000528255 1029 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.71□□□□□ -1.82
CACNA1FO60840 ELOCP32-201ENST00000548625 324 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AC011611.5-201ENST00000552477 578 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.71□□□□□ -1.82
CACNA1FO60840 IGHV3-29-201ENST00000604817 344 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AC068792.1-201ENST00000621354 417 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 Z69908.1-201ENST00000622603 247 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AF246928.1-201ENST00000623768 87 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AC079248.2-201ENST00000623779 326 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.71□□□□□ -1.82
CACNA1FO60840 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CACNA1FO60840 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CACNA1FO60840 MTND5P19-201ENST00000424872 1794 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CACNA1FO60840 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.71□□□□□ -1.82
CACNA1FO60840 Y_RNA.77-201ENST00000362962 107 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 RNU5B-1-201ENST00000363286 116 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 Y_RNA.194-201ENST00000363985 102 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 Y_RNA.578-201ENST00000390903 88 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 MTCO3P30-201ENST00000426425 670 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.71□□□□□ -1.82
CACNA1FO60840 RPL34P26-201ENST00000445636 354 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 MRPL42P4-201ENST00000453267 443 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AC107398.1-201ENST00000486904 505 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.71□□□□□ -1.82
CACNA1FO60840 MTCO3P7-201ENST00000510008 774 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.71□□□□□ -1.82
CACNA1FO60840 AC108120.2-201ENST00000512973 294 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AC117532.1-201ENST00000514638 323 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.71□□□□□ -1.82
CACNA1FO60840 RFPL1S-203ENST00000539579 330 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AC027104.1-201ENST00000563702 681 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.71□□□□□ -1.82
CACNA1FO60840 AC105129.3-201ENST00000605455 485 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AL360219.1-201ENST00000610230 366 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 AL158163.2-201ENST00000619110 700 ntBASIC3.71□□□□□ -1.82
CACNA1FO60840 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CACNA1FO60840 AL118496.1-201ENST00000440201 1812 ntBASIC3.7□□□□□ -1.82
CACNA1FO60840 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CACNA1FO60840 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CACNA1FO60840 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CACNA1FO60840 RNA5SP27-201ENST00000363839 119 ntBASIC3.7□□□□□ -1.82
CACNA1FO60840 RNU6-560P-201ENST00000364007 108 ntBASIC3.7□□□□□ -1.82
CACNA1FO60840 AL034374.1-201ENST00000406329 351 ntBASIC3.7□□□□□ -1.82
CACNA1FO60840 HMGB3P31-201ENST00000413333 595 ntBASIC3.7□□□□□ -1.82
CACNA1FO60840 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.7□□□□□ -1.82
CACNA1FO60840 RPP40P1-201ENST00000426762 456 ntBASIC3.7□□□□□ -1.82
CACNA1FO60840 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.7□□□□□ -1.82
CACNA1FO60840 AL135938.1-201ENST00000443141 297 ntBASIC3.7□□□□□ -1.82
CACNA1FO60840 AC023512.1-201ENST00000444513 499 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms