Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.59□□□□□ -1.83
SSX4O60224 MTCYBP41-201ENST00000528913 1123 ntBASIC3.59□□□□□ -1.83
SSX4O60224 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX4O60224 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.59□□□□□ -1.83
SSX4O60224 AL121603.1-201ENST00000553815 142 ntBASIC3.59□□□□□ -1.83
SSX4O60224 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.59□□□□□ -1.83
SSX4O60224 AC109446.2-201ENST00000567872 497 ntBASIC3.59□□□□□ -1.83
SSX4O60224 AC011260.1-201ENST00000578420 472 ntBASIC3.59□□□□□ -1.83
SSX4O60224 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX4O60224 AC107214.2-201ENST00000608204 634 ntBASIC3.59□□□□□ -1.83
SSX4O60224 AC103710.4-201ENST00000609301 899 ntBASIC3.59□□□□□ -1.83
SSX4O60224 AL391261.4-201ENST00000616012 481 ntBASIC3.59□□□□□ -1.83
SSX4O60224 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SSX4O60224 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SSX4O60224 AC007494.3-201ENST00000624660 743 ntBASIC3.59□□□□□ -1.83
SSX4O60224 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.59□□□□□ -1.84
SSX4O60224 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.59□□□□□ -1.84
SSX4O60224 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SSX4O60224 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
SSX4O60224 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.59□□□□□ -1.84
SSX4O60224 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
SSX4O60224 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.58□□□□□ -1.84
SSX4O60224 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSX4O60224 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SSX4O60224 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSX4O60224 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SSX4O60224 AL672167.1-206ENST00000356293 943 ntBASIC3.58□□□□□ -1.84
SSX4O60224 Y_RNA.234-201ENST00000364409 97 ntBASIC3.58□□□□□ -1.84
SSX4O60224 RNU6-744P-201ENST00000365557 107 ntBASIC3.58□□□□□ -1.84
SSX4O60224 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SSX4O60224 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSX4O60224 RNU6-1316P-201ENST00000384242 108 ntBASIC3.58□□□□□ -1.84
SSX4O60224 AL031577.2-201ENST00000404133 280 ntBASIC3.58□□□□□ -1.84
SSX4O60224 AL138880.1-201ENST00000405824 642 ntBASIC3.58□□□□□ -1.84
SSX4O60224 RN7SKP266-201ENST00000410232 287 ntBASIC3.58□□□□□ -1.84
SSX4O60224 RNU6-920P-201ENST00000410926 92 ntBASIC3.58□□□□□ -1.84
SSX4O60224 EI24P1-201ENST00000416584 867 ntBASIC3.58□□□□□ -1.84
SSX4O60224 AC009518.2-201ENST00000418056 731 ntBASIC3.58□□□□□ -1.84
SSX4O60224 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.58□□□□□ -1.84
SSX4O60224 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.58□□□□□ -1.84
SSX4O60224 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX4O60224 ATP5HP2-201ENST00000433885 485 ntBASIC3.58□□□□□ -1.84
SSX4O60224 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.58□□□□□ -1.84
SSX4O60224 RPS29P7-201ENST00000439662 171 ntBASIC3.58□□□□□ -1.84
SSX4O60224 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX4O60224 MTATP6P26-201ENST00000445926 662 ntBASIC3.58□□□□□ -1.84
SSX4O60224 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX4O60224 AC097262.1-201ENST00000452559 548 ntBASIC3.58□□□□□ -1.84
SSX4O60224 Z82190.1-201ENST00000454534 490 ntBASIC3.58□□□□□ -1.84
SSX4O60224 CEACAMP4-201ENST00000457676 421 ntBASIC3.58□□□□□ -1.84
SSX4O60224 snoU13.8-201ENST00000458890 104 ntBASIC3.58□□□□□ -1.84
SSX4O60224 RN7SL542P-201ENST00000467147 294 ntBASIC3.58□□□□□ -1.84
SSX4O60224 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX4O60224 AP001086.1-201ENST00000494882 321 ntBASIC3.58□□□□□ -1.84
SSX4O60224 BNIP3P41-201ENST00000503774 571 ntBASIC3.58□□□□□ -1.84
SSX4O60224 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SSX4O60224 POU5F1P7-201ENST00000508759 541 ntBASIC3.58□□□□□ -1.84
SSX4O60224 AC010486.3-201ENST00000511602 785 ntBASIC3.58□□□□□ -1.84
SSX4O60224 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SSX4O60224 RNU6-714P-201ENST00000516963 103 ntBASIC3.58□□□□□ -1.84
SSX4O60224 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.58□□□□□ -1.84
SSX4O60224 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SSX4O60224 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.58□□□□□ -1.84
SSX4O60224 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.58□□□□□ -1.84
SSX4O60224 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.58□□□□□ -1.84
SSX4O60224 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX4O60224 AC023161.2-201ENST00000551218 780 ntBASIC3.58□□□□□ -1.84
SSX4O60224 AC063950.1-201ENST00000552036 308 ntBASIC3.58□□□□□ -1.84
SSX4O60224 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.58□□□□□ -1.84
SSX4O60224 GNRHR2P1-201ENST00000555315 631 ntBASIC3.58□□□□□ -1.84
SSX4O60224 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.58□□□□□ -1.84
SSX4O60224 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX4O60224 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.58□□□□□ -1.84
SSX4O60224 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX4O60224 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX4O60224 BNIP3P23-201ENST00000599655 511 ntBASIC3.58□□□□□ -1.84
SSX4O60224 Z99497.2-201ENST00000603634 310 ntBASIC3.58□□□□□ -1.84
SSX4O60224 MTCYBP22-201ENST00000603788 447 ntBASIC3.58□□□□□ -1.84
SSX4O60224 DUXAP11-201ENST00000603858 526 ntBASIC3.58□□□□□ -1.84
SSX4O60224 AL365503.1-201ENST00000605247 905 ntBASIC3.58□□□□□ -1.84
SSX4O60224 AC106028.5-201ENST00000610332 395 ntBASIC3.58□□□□□ -1.84
SSX4O60224 AL356585.4-201ENST00000623078 1229 ntBASIC3.58□□□□□ -1.84
SSX4O60224 AL356266.1-201ENST00000623311 483 ntBASIC3.58□□□□□ -1.84
SSX4O60224 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSX4O60224 AC008013.2-202ENST00000637965 364 ntBASIC3.58□□□□□ -1.84
SSX4O60224 CRYM-AS1-204ENST00000637983 556 ntBASIC3.58□□□□□ -1.84
SSX4O60224 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.58□□□□□ -1.84
SSX4O60224 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SSX4O60224 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSX4O60224 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SSX4O60224 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SSX4O60224 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.58□□□□□ -1.84
SSX4O60224 MAPK10-372ENST00000641954 3413 ntBASIC3.57□□□□□ -1.84
SSX4O60224 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSX4O60224 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SSX4O60224 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSX4O60224 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SSX4O60224 RNA5SP235-201ENST00000365411 114 ntBASIC3.57□□□□□ -1.84
SSX4O60224 RNA5SP167-201ENST00000365461 116 ntBASIC3.57□□□□□ -1.84
SSX4O60224 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms