Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
KDELR3O43731 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
KDELR3O43731 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.94□□□□□ -1.94
KDELR3O43731 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.94□□□□□ -1.94
KDELR3O43731 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KDELR3O43731 RNU1-35P-201ENST00000362782 153 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 SNORA14A-201ENST00000364773 135 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 FAT1P1-201ENST00000406588 507 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 RNU6-712P-201ENST00000410558 100 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 RN7SKP58-201ENST00000411010 305 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 NDUFB4P5-201ENST00000415445 361 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.93□□□□□ -1.94
KDELR3O43731 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.93□□□□□ -1.94
KDELR3O43731 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.93□□□□□ -1.94
KDELR3O43731 UBE2V1P6-201ENST00000430840 422 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 AC009969.1-201ENST00000438726 172 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.93□□□□□ -1.94
KDELR3O43731 RPS26P30-201ENST00000443431 335 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.93□□□□□ -1.94
KDELR3O43731 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.93□□□□□ -1.94
KDELR3O43731 RPS3AP14-201ENST00000483907 780 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.93□□□□□ -1.94
KDELR3O43731 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.93□□□□□ -1.94
KDELR3O43731 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.93□□□□□ -1.94
KDELR3O43731 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.93□□□□□ -1.94
KDELR3O43731 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.93□□□□□ -1.94
KDELR3O43731 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.93□□□□□ -1.94
KDELR3O43731 AC018630.1-201ENST00000541376 925 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.93□□□□□ -1.94
KDELR3O43731 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.93□□□□□ -1.94
KDELR3O43731 AP001330.4-201ENST00000604350 154 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 AL160281.1-201ENST00000605307 311 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KDELR3O43731 MIR6076-201ENST00000617521 113 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 AL163051.2-201ENST00000618976 735 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 AC009039.2-201ENST00000624524 529 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
KDELR3O43731 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
KDELR3O43731 CUL1P1-201ENST00000509510 2425 ntBASIC2.93□□□□□ -1.94
KDELR3O43731 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.92□□□□□ -1.94
KDELR3O43731 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KDELR3O43731 RNU6-730P-201ENST00000383954 104 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 RNU6-1005P-201ENST00000384519 107 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KDELR3O43731 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.92□□□□□ -1.94
KDELR3O43731 UBE2D3P2-201ENST00000424409 445 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 RPS6P14-201ENST00000425165 719 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.92□□□□□ -1.94
KDELR3O43731 AL035410.1-201ENST00000427409 427 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 OR2B8P-201ENST00000432841 938 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.92□□□□□ -1.94
KDELR3O43731 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.92□□□□□ -1.94
KDELR3O43731 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.92□□□□□ -1.94
KDELR3O43731 MTND2P19-201ENST00000449129 1012 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.92□□□□□ -1.94
KDELR3O43731 NIPA2P5-201ENST00000452282 464 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.92□□□□□ -1.94
KDELR3O43731 RPS4XP6-201ENST00000477670 797 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 RPL30P14-201ENST00000482744 348 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 AC096751.1-202ENST00000502691 1067 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 HMGB1P1-201ENST00000522557 636 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 AC124293.1-201ENST00000530034 493 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 AC126177.3-201ENST00000551839 688 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 MIR4506-201ENST00000584693 77 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 AP004247.3-201ENST00000608682 624 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.92□□□□□ -1.94
KDELR3O43731 AL137790.1-201ENST00000634283 177 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 AC090740.1-201ENST00000623193 2262 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
KDELR3O43731 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
KDELR3O43731 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.92□□□□□ -1.94
KDELR3O43731 AC092435.3-201ENST00000565538 3654 ntBASIC2.92□□□□□ -1.94
KDELR3O43731 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
KDELR3O43731 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KDELR3O43731 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
KDELR3O43731 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.91□□□□□ -1.94
KDELR3O43731 RNU6-1074P-201ENST00000383995 104 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 RNU6-1027P-201ENST00000383998 107 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 RNU6-796P-201ENST00000391086 107 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 AL023807.1-201ENST00000407932 359 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.91□□□□□ -1.94
KDELR3O43731 RNA5SP38-201ENST00000410750 119 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 SSXP9-201ENST00000417503 292 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 AC107083.1-201ENST00000439643 279 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.91□□□□□ -1.94
KDELR3O43731 AL929288.2-201ENST00000446368 407 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 TRBV26-201ENST00000456572 344 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 RPS20P24-201ENST00000457473 361 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 RNA5SP310-201ENST00000459084 116 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 RPS26P21-201ENST00000475397 348 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.91□□□□□ -1.94
KDELR3O43731 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.91□□□□□ -1.94
KDELR3O43731 KLHL2P1-201ENST00000508691 521 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 HIGD1AP13-201ENST00000509878 289 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 RNA5SP385-201ENST00000515947 110 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 RN7SKP282-201ENST00000516824 299 ntBASIC2.91□□□□□ -1.94
KDELR3O43731 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.91□□□□□ -1.94
KDELR3O43731 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.91□□□□□ -1.94
KDELR3O43731 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms