Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 OR5BR1P-201ENST00000524992 1330 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NPHP1O15259 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
NPHP1O15259 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NPHP1O15259 RNA5SP322-201ENST00000363617 119 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 RNU1-33P-201ENST00000364249 162 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 MIR513B-201ENST00000385136 84 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 TAF9BP1-201ENST00000396646 746 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.55□□□□□ -1.68
NPHP1O15259 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.55□□□□□ -1.68
NPHP1O15259 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.55□□□□□ -1.68
NPHP1O15259 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.55□□□□□ -1.68
NPHP1O15259 AC005019.1-201ENST00000436455 431 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.55□□□□□ -1.68
NPHP1O15259 ANP32BP2-201ENST00000454525 545 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 HMGN2P7-201ENST00000456186 273 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.55□□□□□ -1.68
NPHP1O15259 AP001992.1-205ENST00000462248 379 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 AC008155.2-201ENST00000464337 397 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 TMED11P-201ENST00000479478 690 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 RPL31P61-201ENST00000496160 376 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 AC096751.1-202ENST00000502691 1067 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.55□□□□□ -1.68
NPHP1O15259 AC110760.3-202ENST00000515177 371 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.55□□□□□ -1.68
NPHP1O15259 FABP5P12-201ENST00000515543 389 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 RNU2-27P-201ENST00000516185 142 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 IGKV2D-23-201ENST00000518179 286 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 AC008802.1-201ENST00000519121 791 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 AC022861.1-201ENST00000522981 663 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 DEFB131D-201ENST00000526803 184 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NPHP1O15259 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.55□□□□□ -1.68
NPHP1O15259 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.55□□□□□ -1.68
NPHP1O15259 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.55□□□□□ -1.68
NPHP1O15259 ZNF192P1-203ENST00000565888 810 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.55□□□□□ -1.68
NPHP1O15259 AC023510.2-201ENST00000622162 746 ntBASIC4.55□□□□□ -1.68
NPHP1O15259 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.55□□□□□ -1.68
NPHP1O15259 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NPHP1O15259 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NPHP1O15259 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.55□□□□□ -1.68
NPHP1O15259 AL645937.1-201ENST00000641739 1652 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.54□□□□□ -1.68
NPHP1O15259 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NPHP1O15259 ANAPC10P1-201ENST00000395991 556 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 MIR1284-201ENST00000408337 120 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 RNU2-71P-201ENST00000411395 189 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 RPL7P30-201ENST00000420888 709 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 AL139421.1-201ENST00000423010 169 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.54□□□□□ -1.68
NPHP1O15259 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.54□□□□□ -1.68
NPHP1O15259 Z80107.1-201ENST00000436830 412 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 FGF7P5-201ENST00000441829 291 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 AC097493.1-201ENST00000463958 372 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.54□□□□□ -1.68
NPHP1O15259 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.54□□□□□ -1.68
NPHP1O15259 COX7A2P2-201ENST00000505291 250 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 AC010587.2-201ENST00000511727 448 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 RNU6-1095P-201ENST00000516148 108 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 OR5AK1P-201ENST00000524837 922 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.54□□□□□ -1.68
NPHP1O15259 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.54□□□□□ -1.68
NPHP1O15259 MTCO2P15-201ENST00000532655 656 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 AC091515.1-201ENST00000548110 679 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 SETP7-201ENST00000552169 453 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.54□□□□□ -1.68
NPHP1O15259 AC090877.1-201ENST00000561418 344 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.54□□□□□ -1.68
NPHP1O15259 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.54□□□□□ -1.68
NPHP1O15259 AC006023.2-201ENST00000609916 167 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 AC245297.2-201ENST00000610119 565 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 AC097478.2-201ENST00000610572 514 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 AL353748.2-201ENST00000622148 471 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 AC231657.1-201ENST00000624313 397 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.54□□□□□ -1.68
NPHP1O15259 ZNF833P-201ENST00000424938 1494 ntBASIC4.54□□□□□ -1.68
NPHP1O15259 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.54□□□□□ -1.68
NPHP1O15259 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.54□□□□□ -1.68
NPHP1O15259 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.54□□□□□ -1.68
NPHP1O15259 IPO8P1-201ENST00000455509 3109 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NPHP1O15259 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NPHP1O15259 RNU4-35P-201ENST00000362588 141 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 MIR1183-201ENST00000408856 89 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.53□□□□□ -1.68
NPHP1O15259 RN7SKP56-201ENST00000410513 331 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.53□□□□□ -1.68
NPHP1O15259 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.53□□□□□ -1.68
NPHP1O15259 HSFY4P-201ENST00000415994 1181 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NPHP1O15259 MTATP6P27-201ENST00000416987 621 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.53□□□□□ -1.68
NPHP1O15259 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.53□□□□□ -1.68
NPHP1O15259 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.53□□□□□ -1.68
NPHP1O15259 AF228730.2-201ENST00000438784 848 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 AL356535.1-201ENST00000440335 398 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 HSPE1P28-201ENST00000443139 211 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 ARPC3P5-201ENST00000448802 534 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 Z82190.1-201ENST00000454534 490 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms