Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX4O14627 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX4O14627 KLRA1P-201ENST00000503499 986 ntBASIC3.18□□□□□ -1.9
CDX4O14627 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX4O14627 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX4O14627 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.18□□□□□ -1.9
CDX4O14627 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.18□□□□□ -1.9
CDX4O14627 AC093755.1-201ENST00000512950 1023 ntBASIC3.18□□□□□ -1.9
CDX4O14627 AC005798.1-201ENST00000513715 387 ntBASIC3.18□□□□□ -1.9
CDX4O14627 AP006245.1-201ENST00000522549 120 ntBASIC3.18□□□□□ -1.9
CDX4O14627 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.18□□□□□ -1.9
CDX4O14627 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX4O14627 AP001189.2-201ENST00000527320 189 ntBASIC3.18□□□□□ -1.9
CDX4O14627 UBTFL10-201ENST00000528532 562 ntBASIC3.18□□□□□ -1.9
CDX4O14627 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.18□□□□□ -1.9
CDX4O14627 AC020914.4-201ENST00000597690 277 ntBASIC3.18□□□□□ -1.9
CDX4O14627 RNA5SP108-201ENST00000605921 117 ntBASIC3.18□□□□□ -1.9
CDX4O14627 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.18□□□□□ -1.9
CDX4O14627 AC097065.2-201ENST00000608159 533 ntBASIC3.18□□□□□ -1.9
CDX4O14627 AL121895.2-201ENST00000619558 447 ntBASIC3.18□□□□□ -1.9
CDX4O14627 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CDX4O14627 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDX4O14627 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDX4O14627 RIOK3P1-201ENST00000418778 1528 ntBASIC3.18□□□□□ -1.9
CDX4O14627 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.18□□□□□ -1.9
CDX4O14627 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
CDX4O14627 AP005901.5-201ENST00000545779 1796 ntBASIC3.17□□□□□ -1.9
CDX4O14627 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDX4O14627 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDX4O14627 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
CDX4O14627 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.17□□□□□ -1.9
CDX4O14627 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CDX4O14627 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDX4O14627 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDX4O14627 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CDX4O14627 RNU4-68P-201ENST00000364314 141 ntBASIC3.17□□□□□ -1.9
CDX4O14627 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX4O14627 RNU6-921P-201ENST00000384361 107 ntBASIC3.17□□□□□ -1.9
CDX4O14627 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.17□□□□□ -1.9
CDX4O14627 AL136310.1-201ENST00000404926 654 ntBASIC3.17□□□□□ -1.9
CDX4O14627 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.17□□□□□ -1.9
CDX4O14627 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.17□□□□□ -1.9
CDX4O14627 RPS3AP37-201ENST00000419176 745 ntBASIC3.17□□□□□ -1.9
CDX4O14627 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX4O14627 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX4O14627 AC007435.1-201ENST00000421086 415 ntBASIC3.17□□□□□ -1.9
CDX4O14627 AC009237.2-201ENST00000421358 284 ntBASIC3.17□□□□□ -1.9
CDX4O14627 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX4O14627 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDX4O14627 OR51AB1P-201ENST00000429046 620 ntBASIC3.17□□□□□ -1.9
CDX4O14627 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX4O14627 CKS1BP5-201ENST00000434172 273 ntBASIC3.17□□□□□ -1.9
CDX4O14627 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX4O14627 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDX4O14627 EEF1A1P39-201ENST00000440791 250 ntBASIC3.17□□□□□ -1.9
CDX4O14627 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.17□□□□□ -1.9
CDX4O14627 RPL32P28-201ENST00000443577 397 ntBASIC3.17□□□□□ -1.9
CDX4O14627 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX4O14627 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX4O14627 RPL29P29-201ENST00000448725 423 ntBASIC3.17□□□□□ -1.9
CDX4O14627 AC079776.3-201ENST00000450665 370 ntBASIC3.17□□□□□ -1.9
CDX4O14627 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX4O14627 RPL31P50-201ENST00000471002 296 ntBASIC3.17□□□□□ -1.9
CDX4O14627 AC010301.1-201ENST00000473936 355 ntBASIC3.17□□□□□ -1.9
CDX4O14627 RN7SKP116-201ENST00000516902 319 ntBASIC3.17□□□□□ -1.9
CDX4O14627 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.17□□□□□ -1.9
CDX4O14627 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX4O14627 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX4O14627 OR8L1P-201ENST00000534005 955 ntBASIC3.17□□□□□ -1.9
CDX4O14627 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.17□□□□□ -1.9
CDX4O14627 AGGF1P8-201ENST00000562979 1000 ntBASIC3.17□□□□□ -1.9
CDX4O14627 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX4O14627 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX4O14627 HSPE1P14-201ENST00000605812 302 ntBASIC3.17□□□□□ -1.9
CDX4O14627 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX4O14627 AC097478.2-201ENST00000610572 514 ntBASIC3.17□□□□□ -1.9
CDX4O14627 AC024257.5-201ENST00000612739 531 ntBASIC3.17□□□□□ -1.9
CDX4O14627 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX4O14627 AC233309.1-201ENST00000619522 751 ntBASIC3.17□□□□□ -1.9
CDX4O14627 AC013470.4-201ENST00000619978 986 ntBASIC3.17□□□□□ -1.9
CDX4O14627 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX4O14627 LINC02211-204ENST00000642024 1070 ntBASIC3.17□□□□□ -1.9
CDX4O14627 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDX4O14627 MAPK10-253ENST00000641010 4072 ntBASIC3.17□□□□□ -1.9
CDX4O14627 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDX4O14627 AC095050.2-201ENST00000510748 1458 ntBASIC3.16□□□□□ -1.9
CDX4O14627 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
CDX4O14627 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.16□□□□□ -1.9
CDX4O14627 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CDX4O14627 AC068647.1-201ENST00000489539 2265 ntBASIC3.16□□□□□ -1.9
CDX4O14627 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDX4O14627 snoZ40.1-201ENST00000364540 72 ntBASIC3.16□□□□□ -1.9
CDX4O14627 RNU4-28P-201ENST00000364739 141 ntBASIC3.16□□□□□ -1.9
CDX4O14627 SNORA7.4-201ENST00000384249 137 ntBASIC3.16□□□□□ -1.9
CDX4O14627 SNORD65.1-201ENST00000390889 71 ntBASIC3.16□□□□□ -1.9
CDX4O14627 AL133384.1-201ENST00000412744 351 ntBASIC3.16□□□□□ -1.9
CDX4O14627 FCF1P2-201ENST00000415284 583 ntBASIC3.16□□□□□ -1.9
CDX4O14627 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.16□□□□□ -1.9
CDX4O14627 RPL22P18-201ENST00000417197 377 ntBASIC3.16□□□□□ -1.9
CDX4O14627 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms