Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MTCO1P6-201ENST00000481192 1384 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC092435.3-201ENST00000565538 3654 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 RNU6-575P-201ENST00000411326 105 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 PTP4A1P7-201ENST00000423476 514 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 RAB11AP1-201ENST00000442978 646 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 HSPE1P28-201ENST00000443139 211 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 RPL36AP33-201ENST00000450395 310 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AP004217.1-201ENST00000480579 346 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC126121.1-201ENST00000482313 553 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 OR5H4P-201ENST00000510851 923 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 RNA5SP367-201ENST00000516557 118 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 IGJP1-201ENST00000522682 475 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AP001372.4-201ENST00000524889 472 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC004217.3-201ENST00000551552 878 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 MAGOH2P-202ENST00000584384 429 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 VN1R88P-201ENST00000596787 292 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC096947.1-201ENST00000603233 470 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC024060.1-201ENST00000607052 494 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC093673.2-201ENST00000609674 331 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC018926.3-201ENST00000618841 406 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC091903.1-201ENST00000624322 454 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC139713.2-210ENST00000641741 992 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC025263.3-201ENST00000622965 1396 ntBASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
TMX2-CTNND1H3BSU7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 ANKRD36P1-201ENST00000344424 659 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 RNU6-236P-201ENST00000363886 106 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 SNORA51.4-201ENST00000364993 124 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 VN1R51P-201ENST00000411675 945 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 TAF13P2-201ENST00000416876 286 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC244505.3-201ENST00000454598 187 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 RPL21P104-201ENST00000464143 478 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 ST13P14-201ENST00000474095 734 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 RPL30P11-201ENST00000495304 339 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 VN1R104P-201ENST00000505115 1009 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC091860.1-201ENST00000505723 432 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC093752.1-206ENST00000511823 336 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 SCARNA1-201ENST00000517138 166 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC010306.1-201ENST00000523223 1117 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC087276.1-201ENST00000529659 480 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC124293.1-201ENST00000530034 493 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC087897.1-201ENST00000550134 156 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC069234.5-201ENST00000611056 416 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC104985.3-201ENST00000623479 597 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 OR4G3P-201ENST00000633500 913 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC017104.5-201ENST00000637647 639 ntBASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.94□□□□□ -1.94
TMX2-CTNND1H3BSU7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms