Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 CR769767.1-201ENST00000436337 346 ntBASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 AC010099.1-201ENST00000455434 375 ntBASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 KC877373.1-201ENST00000479066 408 ntBASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 PCNAP1-201ENST00000505363 709 ntBASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 AC091826.1-201ENST00000514065 313 ntBASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 PRELID3BP4-201ENST00000515476 571 ntBASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 AC087272.1-201ENST00000523624 533 ntBASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 H3F3AP1-201ENST00000559984 334 ntBASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 EIF5A2P1-201ENST00000564027 460 ntBASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 AC008687.2-201ENST00000597865 520 ntBASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 DPRXP5-201ENST00000604662 539 ntBASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 AC008277.2-201ENST00000605196 797 ntBASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 AL731566.2-201ENST00000618971 317 ntBASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 AC068880.5-201ENST00000624331 290 ntBASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 BX649567.1-201ENST00000642071 1134 ntBASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV13-1A0A0B4J241 AC123912.3-201ENST00000600907 1367 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 RNU5D-1-201ENST00000363299 116 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 MIR592-201ENST00000384959 97 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 SSXP10-201ENST00000402595 565 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 SNORA11C-201ENST00000408532 129 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 B3GALNT1P1-201ENST00000420569 975 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AL389915.1-201ENST00000422463 466 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AL158156.1-201ENST00000422509 473 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 TMEM167AP1-201ENST00000423409 219 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AL050321.1-201ENST00000432363 400 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AL590762.3-201ENST00000436372 640 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 VN1R34P-201ENST00000447387 883 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 RBM43P1-201ENST00000476891 1081 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 SUMO1P1-201ENST00000497904 306 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 OR5H5P-201ENST00000503164 928 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AC083906.5-201ENST00000503722 328 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AC092593.2-201ENST00000513866 913 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 HMGB1P23-201ENST00000518743 568 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 PSMA2P1-201ENST00000526365 646 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 OR7K1P-201ENST00000546439 926 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AC115989.2-201ENST00000578640 563 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 MIR5004-201ENST00000579078 107 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 BX664608.1-201ENST00000610519 487 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AC006329.2-201ENST00000611491 394 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AC012314.7-201ENST00000619693 93 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV13-1A0A0B4J241 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 AL512283.1-201ENST00000606756 1384 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 AC007342.9-201ENST00000623877 1385 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 CPD-202ENST00000543464 4007 ntTSL 2 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 RNA5SP72-201ENST00000364442 117 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 RNA5SP267-201ENST00000364893 126 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 MIR493-201ENST00000385254 89 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 RNA5SP181-201ENST00000410246 98 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 AL513175.2-201ENST00000422071 443 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 HMGN1P8-201ENST00000463578 288 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 FAM133DP-201ENST00000464802 691 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 RN7SL807P-201ENST00000470923 297 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 RPS15AP34-201ENST00000487776 387 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms