Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 RNA5SP402-201ENST00000517148 110 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 AP003467.2-201ENST00000520175 319 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 CIR1P1-201ENST00000524055 1133 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 SERPINE4P-201ENST00000554978 281 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 AC012182.1-201ENST00000570133 895 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 AC019159.1-201ENST00000605094 187 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 HMGB1P51-201ENST00000605166 638 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 AC067747.1-201ENST00000608026 250 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.15□□□□□ -2.06
TRAV27A0A087WT01 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
TRAV27A0A087WT01 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
TRAV27A0A087WT01 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 RNU6-799P-201ENST00000363567 107 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 SNORD114-30-201ENST00000364448 72 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 AL359511.1-201ENST00000402970 211 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 AC092638.1-201ENST00000411966 1275 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 MTCO1P39-201ENST00000426148 480 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 AC005189.1-201ENST00000431286 310 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 RPS23P3-201ENST00000470993 430 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 GAPDHP39-201ENST00000481866 979 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 RPL36AP51-201ENST00000487216 318 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 AC090543.1-201ENST00000492168 485 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 AC108120.2-201ENST00000512973 294 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 UBTFL10-201ENST00000528532 562 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 ZNF92P3-201ENST00000596594 954 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 AC007621.1-201ENST00000604544 437 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 HSPE1P14-201ENST00000605812 302 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 AC104237.2-201ENST00000612456 443 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 AC006963.1-201ENST00000624003 1052 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 ZNF271P-202ENST00000465539 1970 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 AC138915.1-201ENST00000565427 1685 ntBASIC2.15□□□□□ -2.07
TRAV27A0A087WT01 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 RNU6-761P-201ENST00000384148 107 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 RNA5SP184-201ENST00000411071 108 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 HMGN2P35-201ENST00000412164 270 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 NUP35P1-201ENST00000422734 947 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 Z77249.1-201ENST00000444622 1175 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 AL109933.2-201ENST00000452651 260 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 snoU13.7-201ENST00000459220 104 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 AC009901.1-201ENST00000506703 541 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 AC026436.1-201ENST00000510537 270 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 AC025857.1-201ENST00000525252 377 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 AC022690.1-201ENST00000526681 550 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 OR4R2P-201ENST00000530815 597 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 NBEAP1-201ENST00000554452 979 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 AP001029.3-201ENST00000588063 596 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 AC009220.3-201ENST00000604318 586 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 MIR6817-201ENST00000615588 66 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 U6.48-201ENST00000618523 106 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 AC002064.3-201ENST00000623448 346 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 AC079228.1-201ENST00000624774 1049 ntBASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRAV27A0A087WT01 ZNF37BP-203ENST00000452306 1352 ntBASIC2.13□□□□□ -2.07
TRAV27A0A087WT01 RPL21P132-201ENST00000331267 462 ntBASIC2.13□□□□□ -2.07
TRAV27A0A087WT01 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAV27A0A087WT01 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV27A0A087WT01 RNU6-452P-201ENST00000384406 107 ntBASIC2.13□□□□□ -2.07
TRAV27A0A087WT01 SNORA11.1-201ENST00000408133 129 ntBASIC2.13□□□□□ -2.07
TRAV27A0A087WT01 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV27A0A087WT01 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV27A0A087WT01 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV27A0A087WT01 PTP4A1P3-201ENST00000433661 420 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms