Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 MFSD8-219ENST00000641228 2559 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 PABPC1P6-201ENST00000445594 1829 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 C4BPAP1-201ENST00000415474 1893 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 RNU4-90P-201ENST00000362773 141 ntBASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 RNU6-449P-201ENST00000383914 107 ntBASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 AC009804.1-201ENST00000400949 179 ntBASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 AL591034.2-201ENST00000402839 359 ntBASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 AC016925.1-201ENST00000458303 298 ntBASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 AC006499.3-201ENST00000506077 748 ntBASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 MIR132-201ENST00000591554 101 ntBASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CCDC61Q9Y6R9 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 AL021877.2-201ENST00000624442 10684 ntBASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 AL606537.1-201ENST00000607258 2011 ntBASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 RNU6-1284P-201ENST00000363701 100 ntBASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 BX679664.1-201ENST00000434429 253 ntBASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 RPL37P6-202ENST00000464216 403 ntBASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 AC006427.1-201ENST00000514359 712 ntBASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 RN7SKP288-201ENST00000516227 268 ntBASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 AC007342.5-201ENST00000571340 2142 ntBASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 RNU6-85P-201ENST00000605989 107 ntBASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 AC037487.3-201ENST00000606668 112 ntBASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 MIR6837-201ENST00000620884 64 ntBASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 MIR6730-201ENST00000622213 67 ntBASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 AC112243.1-201ENST00000623949 3851 ntBASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC7.92□□□□□ -1.14
CCDC61Q9Y6R9 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 LINC01963-201ENST00000562038 3148 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 RNA5SP183-201ENST00000362452 119 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 Y_RNA.127-201ENST00000363386 109 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 RNU6-923P-201ENST00000364753 107 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 RNA5SP30-201ENST00000365552 115 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 MIR937-201ENST00000401271 86 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 RNU2-61P-201ENST00000411069 191 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms