Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 RN7SL354P-201ENST00000469282 294 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 RPL21P126-201ENST00000470049 478 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 AC006463.2-201ENST00000473326 348 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 TMED11P-201ENST00000479478 690 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 AP002453.2-201ENST00000533503 320 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 MTCO3P24-201ENST00000572729 782 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 MIR4330-201ENST00000579077 105 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 AC020914.4-201ENST00000597690 277 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 AP000403.1-201ENST00000603349 851 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 AC025946.2-201ENST00000603398 234 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 AC113403.1-201ENST00000604910 193 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 AL008636.1-201ENST00000625038 1018 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 AC244258.1-201ENST00000637553 1071 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP25Q9UHP3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP25Q9UHP3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP25Q9UHP3 MTND5P26-201ENST00000426018 1752 ntBASIC4.83□□□□□ -1.64
USP25Q9UHP3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
USP25Q9UHP3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 AC027287.1-201ENST00000553115 1453 ntBASIC4.82□□□□□ -1.64
USP25Q9UHP3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 RNY4P24-201ENST00000362735 96 ntBASIC4.82□□□□□ -1.64
USP25Q9UHP3 RNA5SP322-201ENST00000363617 119 ntBASIC4.82□□□□□ -1.64
USP25Q9UHP3 MIR548F1-201ENST00000408667 84 ntBASIC4.82□□□□□ -1.64
USP25Q9UHP3 MIR1179-201ENST00000408703 91 ntBASIC4.82□□□□□ -1.64
USP25Q9UHP3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 RPS27AP14-201ENST00000422868 454 ntBASIC4.82□□□□□ -1.64
USP25Q9UHP3 AC245028.1-201ENST00000423259 256 ntBASIC4.82□□□□□ -1.64
USP25Q9UHP3 OR8F1P-201ENST00000425243 930 ntBASIC4.82□□□□□ -1.64
USP25Q9UHP3 AL590233.1-201ENST00000430017 456 ntBASIC4.82□□□□□ -1.64
USP25Q9UHP3 AF228730.2-201ENST00000438784 848 ntBASIC4.82□□□□□ -1.64
USP25Q9UHP3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 EEF1E1P1-201ENST00000446998 430 ntBASIC4.82□□□□□ -1.64
USP25Q9UHP3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 MTCO3P38-201ENST00000468910 766 ntBASIC4.82□□□□□ -1.64
USP25Q9UHP3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 AC023424.2-201ENST00000493479 777 ntBASIC4.82□□□□□ -1.64
USP25Q9UHP3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 SEPT7P9-203ENST00000604116 343 ntBASIC4.82□□□□□ -1.64
USP25Q9UHP3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 AC040168.1-201ENST00000623594 991 ntBASIC4.82□□□□□ -1.64
USP25Q9UHP3 FAM35DP-201ENST00000323387 2712 ntBASIC4.82□□□□□ -1.64
USP25Q9UHP3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.82□□□□□ -1.64
USP25Q9UHP3 AL022578.1-201ENST00000439330 1433 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP25Q9UHP3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP25Q9UHP3 MTND4P16-201ENST00000466108 1367 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
USP25Q9UHP3 MIR331-201ENST00000362302 94 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 RNU6-867P-201ENST00000364956 107 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 RNU6-952P-201ENST00000391164 108 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 RAP1BP3-201ENST00000407180 549 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 RNU6-248P-201ENST00000410720 107 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 HMGN1P14-201ENST00000412459 517 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 RPL26P29-201ENST00000415623 438 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 AL590139.1-201ENST00000416267 400 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.81□□□□□ -1.64
USP25Q9UHP3 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.81□□□□□ -1.64
USP25Q9UHP3 RPEP3-201ENST00000425462 676 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 AC092017.2-201ENST00000427600 362 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 RPL23AP1-201ENST00000428990 471 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 AC011742.1-201ENST00000431448 434 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 AL139415.2-201ENST00000431968 163 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 AC011998.1-201ENST00000433403 117 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 MRPS18BP2-201ENST00000434310 759 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.81□□□□□ -1.64
USP25Q9UHP3 AL356535.1-201ENST00000440335 398 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 NANOGNBP1-201ENST00000448444 480 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 RAD23BP3-201ENST00000454157 1152 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 snoU109.4-201ENST00000458953 143 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 AC091564.1-201ENST00000464563 479 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 RPL31P50-201ENST00000471002 296 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 RPL7P24-201ENST00000493052 752 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 AC116353.2-201ENST00000505332 712 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 AL592156.1-201ENST00000508758 304 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.81□□□□□ -1.64
USP25Q9UHP3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.81□□□□□ -1.64
USP25Q9UHP3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms