Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.51□□□□□ -1.69
COL20A1Q9P218 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.51□□□□□ -1.69
COL20A1Q9P218 U8.18-201ENST00000459285 133 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 RN7SL323P-201ENST00000494712 295 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 AP003385.6-201ENST00000531603 374 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.51□□□□□ -1.69
COL20A1Q9P218 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.51□□□□□ -1.69
COL20A1Q9P218 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.51□□□□□ -1.69
COL20A1Q9P218 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.51□□□□□ -1.69
COL20A1Q9P218 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.51□□□□□ -1.69
COL20A1Q9P218 AC087683.1-201ENST00000591187 441 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 BCRP9-201ENST00000605312 388 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL20A1Q9P218 AL139089.1-201ENST00000620372 975 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 AC084035.1-201ENST00000634543 607 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 CRYM-AS1-204ENST00000637983 556 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
COL20A1Q9P218 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL20A1Q9P218 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.51□□□□□ -1.69
COL20A1Q9P218 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
COL20A1Q9P218 AL049780.3-201ENST00000624612 1583 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.51□□□□□ -1.69
COL20A1Q9P218 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL20A1Q9P218 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL20A1Q9P218 MTND4P26-201ENST00000415971 1359 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL20A1Q9P218 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL20A1Q9P218 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
COL20A1Q9P218 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL20A1Q9P218 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL20A1Q9P218 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.5□□□□□ -1.69
COL20A1Q9P218 RNU6-761P-201ENST00000384148 107 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 DEFB108C-201ENST00000400154 252 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 MTCYBP24-201ENST00000420387 1106 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 RPS12P5-201ENST00000423449 371 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 AC005517.2-201ENST00000424673 553 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL20A1Q9P218 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.5□□□□□ -1.69
COL20A1Q9P218 PPIAP3-201ENST00000450588 505 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 snoU109.1-201ENST00000459339 135 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 RN7SL585P-201ENST00000470538 280 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 PPIAP15-201ENST00000479662 484 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.5□□□□□ -1.69
COL20A1Q9P218 AC112204.1-201ENST00000502591 103 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 AC025554.1-201ENST00000505641 188 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.5□□□□□ -1.69
COL20A1Q9P218 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.5□□□□□ -1.69
COL20A1Q9P218 PAICSP4-201ENST00000517543 1253 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 OR4R3P-201ENST00000525084 838 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 MIR5697-201ENST00000578045 78 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 MIR4444-1-201ENST00000581696 74 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 MIR4444-2-201ENST00000584390 74 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 BNIP3P8-201ENST00000597863 560 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.5□□□□□ -1.69
COL20A1Q9P218 AC078795.2-201ENST00000602835 1252 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 AC112230.1-201ENST00000604342 547 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 AC091965.4-201ENST00000607691 587 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 AC013562.2-201ENST00000611632 603 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 AC009237.17-201ENST00000618111 748 ntBASIC4.5□□□□□ -1.69
COL20A1Q9P218 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.5□□□□□ -1.69
COL20A1Q9P218 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL20A1Q9P218 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL20A1Q9P218 TEX21P-201ENST00000447107 1476 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 AP002001.2-201ENST00000529025 1469 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL20A1Q9P218 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL20A1Q9P218 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL20A1Q9P218 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.49□□□□□ -1.69
COL20A1Q9P218 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
COL20A1Q9P218 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL20A1Q9P218 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL20A1Q9P218 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL20A1Q9P218 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL20A1Q9P218 RNA5SP258-201ENST00000362750 119 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 RNU4-75P-201ENST00000364621 146 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 Y_RNA.359-201ENST00000365498 102 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 RNU6-533P-201ENST00000384144 107 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 SNORA75-201ENST00000384158 137 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 RNU6-809P-201ENST00000384461 107 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 Y_RNA.505-201ENST00000384489 102 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 MIR23B-201ENST00000384832 97 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 RNA5SP171-201ENST00000391071 115 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL20A1Q9P218 HMGN1P14-201ENST00000412459 517 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 AL356583.2-201ENST00000426536 280 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 AL445669.1-201ENST00000426743 755 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 AC007389.2-201ENST00000434630 306 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 RPS24P1-201ENST00000438550 371 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 AC083863.1-201ENST00000438811 231 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.49□□□□□ -1.69
COL20A1Q9P218 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.49□□□□□ -1.69
COL20A1Q9P218 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.49□□□□□ -1.69
COL20A1Q9P218 AL033528.1-201ENST00000453780 140 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 SNORD42A-201ENST00000459584 64 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 HMGB1P36-201ENST00000487709 576 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 AC023424.2-201ENST00000493479 777 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.49□□□□□ -1.69
COL20A1Q9P218 SLC25A15P5-201ENST00000508033 253 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 PPBPP1-201ENST00000510807 373 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms