Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 AC023598.1-201ENST00000472521 361 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 AC135721.1-201ENST00000497954 479 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 GAPDHP56-201ENST00000506031 988 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 PPBPP1-201ENST00000510807 373 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 AC022616.3-201ENST00000523940 148 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 AC018630.1-201ENST00000541376 925 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 AL133153.1-201ENST00000557756 303 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 AC092954.2-201ENST00000609103 430 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 AC091905.2-201ENST00000623143 306 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 MARK2P15-201ENST00000432204 2186 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 OR1S2-201ENST00000302592 978 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 Y_RNA.1-201ENST00000352915 104 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 RNU6-278P-201ENST00000390945 109 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 RNU6-754P-201ENST00000391166 107 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 ELOCP4-201ENST00000420090 333 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 AC137499.1-201ENST00000427602 88 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 DPPA2P1-201ENST00000428060 556 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 BRWD1P3-201ENST00000428816 390 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 AC002486.1-201ENST00000435098 391 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 AC011753.3-201ENST00000443436 406 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 NANOGP10-201ENST00000453325 895 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 AC010469.1-201ENST00000463864 576 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 RPS3AP50-201ENST00000487064 803 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 RPL36AP41-201ENST00000493820 306 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 AC093278.1-201ENST00000494700 600 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 AC109927.2-201ENST00000506416 303 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 IGLV3-26-201ENST00000520756 302 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 AP001893.2-201ENST00000526949 202 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 AC006338.1-201ENST00000618453 749 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 AL713922.2-201ENST00000619384 716 ntBASIC4.57□□□□□ -1.68
MKS1Q9NXB0 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MKS1Q9NXB0 MTCO1P11-201ENST00000429111 1528 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 RN7SKP95-201ENST00000362860 303 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 RNY1P12-201ENST00000364251 105 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 RNU6-169P-201ENST00000365336 107 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 RNU6-432P-201ENST00000384196 109 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 CALM2P3-201ENST00000400429 449 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 AL391361.1-201ENST00000405580 489 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 SNORA74C-2-201ENST00000411179 201 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 DPPA2P3-201ENST00000411853 655 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 RPL23AP38-201ENST00000423801 469 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 Z99127.3-201ENST00000448158 395 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 AC013267.1-201ENST00000458227 267 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms