Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AL133153.1-201ENST00000557756 303 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC087385.3-201ENST00000620477 187 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC009161.2-201ENST00000624626 138 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 LINC00622-201ENST00000562811 1570 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 LINC01109-201ENST00000603837 3081 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 SNURFL-201ENST00000309296 343 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 RNU6-398P-201ENST00000384143 109 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 RNA5SP87-201ENST00000384155 118 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 MIR124-3-201ENST00000384866 87 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 RNU6-780P-201ENST00000391030 104 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 Y_RNA.604-201ENST00000410574 102 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 MTATP6P18-201ENST00000417994 673 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 RPL23AP38-201ENST00000423801 469 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 DNAJC19P7-201ENST00000428811 344 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 PRPF38AP2-201ENST00000438179 851 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 AL121871.1-201ENST00000443413 436 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 AC079781.2-201ENST00000446424 169 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 AC073587.1-201ENST00000447093 876 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 WASF1P1-201ENST00000447560 1131 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 AC140076.1-201ENST00000449897 361 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 RN7SL354P-201ENST00000469282 294 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 RN7SL41P-201ENST00000476144 297 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 AC092989.1-201ENST00000481235 277 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 AC026801.2-201ENST00000515352 425 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 RNU6-1095P-201ENST00000516148 108 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 AF186190.1-201ENST00000517470 480 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 AK6P1-201ENST00000540219 478 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 AL512360.1-201ENST00000555346 234 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 MIR4270-201ENST00000581799 70 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 AC209154.1-201ENST00000582156 337 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 SLC25A36P1-201ENST00000590111 465 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 RPL12P25-202ENST00000598100 674 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 AL031320.1-201ENST00000604177 357 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 AP002360.4-201ENST00000606980 481 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 AL603758.1-201ENST00000618654 241 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 OR14L1P-202ENST00000641545 3009 ntBASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCM2LQ9NUG4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 AC138915.3-201ENST00000562908 1389 ntBASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 RNU6-1155P-201ENST00000363554 107 ntBASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 Y_RNA.159-201ENST00000363674 87 ntBASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 U3.11-201ENST00000364476 212 ntBASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 RNU6-169P-201ENST00000365336 107 ntBASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 RNU1-39P-201ENST00000383897 165 ntBASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 Y_RNA.409-201ENST00000383990 98 ntBASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 AL603766.1-201ENST00000407763 664 ntBASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 USP9YP27-201ENST00000418455 438 ntBASIC4.55□□□□□ -1.68
CCM2LQ9NUG4 OR2AM1P-201ENST00000422137 422 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms