Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 RNU7-125P-201ENST00000458760 62 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 snoU13.7-201ENST00000459220 104 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AC111000.2-201ENST00000507775 550 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 PTGES3P3-201ENST00000511479 482 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AC010342.1-201ENST00000514047 877 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 RNA5SP309-201ENST00000516670 106 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 RNU6-678P-201ENST00000516832 109 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 RN7SKP234-201ENST00000517173 224 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 ZNF705CP-201ENST00000530515 889 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AC011611.1-201ENST00000552179 197 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 CENPUP2-201ENST00000555897 1186 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 MIR4504-201ENST00000577413 92 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 ZNF415P1-201ENST00000582279 1166 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 KLKP1-201ENST00000595979 403 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AP001521.1-201ENST00000609150 300 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AC004223.4-201ENST00000612426 332 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AL354976.1-201ENST00000613843 387 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AP003355.3-201ENST00000623465 114 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AP003399.1-201ENST00000637534 361 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AL732372.2-225ENST00000642124 456 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AC073073.2-201ENST00000609827 2578 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AL356274.2-201ENST00000624379 3752 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AL023807.1-201ENST00000407932 359 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 U3.39-201ENST00000408569 239 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AC004552.1-201ENST00000419089 348 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AL035407.1-201ENST00000429211 571 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 RPL36P19-201ENST00000430744 301 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 MTND4P6-201ENST00000438297 472 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AL356535.1-201ENST00000440335 398 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 USP9YP10-201ENST00000454868 628 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 RPL18AP17-201ENST00000455326 198 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 TRBV26-201ENST00000456572 344 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AL122001.1-201ENST00000457027 370 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 RPL9P32-201ENST00000464118 620 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 RPL37P6-202ENST00000464216 403 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 RPS26P3-201ENST00000470205 348 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 RPL30P6-201ENST00000475925 342 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AC090543.2-201ENST00000483963 348 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AC004057.1-201ENST00000485827 348 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 USP9YP5-201ENST00000511770 630 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AL356057.1-201ENST00000533798 831 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AC090502.2-201ENST00000549267 280 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AL389895.1-201ENST00000554127 252 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AC011471.1-201ENST00000585766 187 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 VN1R92P-201ENST00000598511 928 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AL139395.1-201ENST00000603662 160 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AC005000.2-201ENST00000605468 310 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AC072039.2-201ENST00000608883 439 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AC122133.1-201ENST00000613964 233 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AC006065.5-201ENST00000623427 349 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AL445523.1-201ENST00000451184 1362 ntBASIC4.14□□□□□ -1.75
DDX4Q9NQI0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.14□□□□□ -1.75
DDX4Q9NQI0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms