Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AL121877.1-201ENST00000453704 622 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 snoU13.1-201ENST00000459157 104 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 FTH1P2-201ENST00000466086 412 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 FTH1P24-201ENST00000503502 462 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.9□□□□□ -1.63
CD248Q9HCU0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.9□□□□□ -1.63
CD248Q9HCU0 AP003467.2-201ENST00000520175 319 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 AC105029.1-201ENST00000520250 669 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 DEFB131D-201ENST00000526803 184 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 AC243972.3-201ENST00000539655 198 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.9□□□□□ -1.63
CD248Q9HCU0 AL110118.1-201ENST00000553543 400 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.9□□□□□ -1.63
CD248Q9HCU0 CYCSP2-201ENST00000558168 301 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.9□□□□□ -1.63
CD248Q9HCU0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.9□□□□□ -1.63
CD248Q9HCU0 AC007151.1-201ENST00000572774 483 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 RN7SL802P-201ENST00000577858 299 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CD248Q9HCU0 AC022726.1-201ENST00000587475 207 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 AC018638.8-201ENST00000588755 281 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 AC245014.2-201ENST00000603689 287 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 AL391646.1-201ENST00000603860 190 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 AC124312.5-201ENST00000604451 268 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 AC246785.4-201ENST00000605374 287 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 AL133255.1-201ENST00000606374 441 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CD248Q9HCU0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD248Q9HCU0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CD248Q9HCU0 MIR6758-201ENST00000620653 63 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 AC067931.1-201ENST00000624190 671 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD248Q9HCU0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.9□□□□□ -1.63
CD248Q9HCU0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD248Q9HCU0 AC025031.4-201ENST00000621248 3271 ntBASIC4.9□□□□□ -1.63
CD248Q9HCU0 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.9□□□□□ -1.63
CD248Q9HCU0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD248Q9HCU0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD248Q9HCU0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD248Q9HCU0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD248Q9HCU0 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD248Q9HCU0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 AC008758.3-201ENST00000507003 1829 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 MIR448-201ENST00000362131 111 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 Y_RNA.25-201ENST00000362528 102 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 U8.3-201ENST00000363321 132 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 RNY3P3-201ENST00000363816 102 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 Y_RNA.216-201ENST00000364205 93 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD248Q9HCU0 LAP3P1-201ENST00000403648 294 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 RN7SKP106-201ENST00000410832 272 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 AL359704.1-201ENST00000411586 781 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 PDSS1P1-201ENST00000422953 1114 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 NPM1P34-201ENST00000428821 893 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 AC109583.1-201ENST00000432156 268 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 RPS6P12-201ENST00000432491 726 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 TDGF1P1-201ENST00000445734 527 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 Z82190.1-201ENST00000454534 490 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 AC099563.1-201ENST00000456086 418 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 RN7SL385P-201ENST00000468873 276 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 RN7SKP92-201ENST00000517266 244 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 AC013828.2-201ENST00000532487 235 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 POLR2KP1-201ENST00000553226 168 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 MIR4715-201ENST00000584117 79 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 AC243960.4-201ENST00000600532 288 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 FAM27B-201ENST00000610601 213 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 MIR1302-1-201ENST00000637932 143 ntBASIC4.89□□□□□ -1.63
CD248Q9HCU0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CD248Q9HCU0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD248Q9HCU0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD248Q9HCU0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD248Q9HCU0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD248Q9HCU0 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 RNU6-582P-201ENST00000362989 107 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 RNU6-216P-201ENST00000363282 104 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 RNU6-254P-201ENST00000363377 107 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 SNORD113.2-201ENST00000364166 89 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 U3.15-201ENST00000365398 212 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms