Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AP003461.1-201ENST00000528866 78 ntBASIC3.97□□□□□ -1.77
UPF2Q9HAU5 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.97□□□□□ -1.77
UPF2Q9HAU5 AP000619.3-201ENST00000535634 1127 ntBASIC3.97□□□□□ -1.77
UPF2Q9HAU5 HIGD1AP17-201ENST00000554576 276 ntBASIC3.97□□□□□ -1.77
UPF2Q9HAU5 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.97□□□□□ -1.77
UPF2Q9HAU5 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.97□□□□□ -1.77
UPF2Q9HAU5 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.97□□□□□ -1.77
UPF2Q9HAU5 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.97□□□□□ -1.77
UPF2Q9HAU5 BNIP3P26-201ENST00000600827 554 ntBASIC3.97□□□□□ -1.77
UPF2Q9HAU5 LLPHP1-201ENST00000603571 367 ntBASIC3.97□□□□□ -1.77
UPF2Q9HAU5 Z99497.2-201ENST00000603634 310 ntBASIC3.97□□□□□ -1.77
UPF2Q9HAU5 AL158042.1-201ENST00000605338 460 ntBASIC3.97□□□□□ -1.77
UPF2Q9HAU5 AL157817.1-201ENST00000614264 790 ntBASIC3.97□□□□□ -1.77
UPF2Q9HAU5 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
UPF2Q9HAU5 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.97□□□□□ -1.77
UPF2Q9HAU5 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.97□□□□□ -1.77
UPF2Q9HAU5 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.97□□□□□ -1.77
UPF2Q9HAU5 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
UPF2Q9HAU5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
UPF2Q9HAU5 SGO1P2-201ENST00000429458 1589 ntBASIC3.97□□□□□ -1.77
UPF2Q9HAU5 ZNF33CP-201ENST00000432492 2030 ntBASIC3.97□□□□□ -1.77
UPF2Q9HAU5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UPF2Q9HAU5 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
UPF2Q9HAU5 HMGB1P5-201ENST00000255320 642 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 RNU1-70P-201ENST00000362618 164 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 RNU6-582P-201ENST00000362989 107 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 AL356967.1-201ENST00000406305 431 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 MIR1193-201ENST00000408109 78 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 CRYBB2P1-203ENST00000415709 538 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 SEPT7P5-201ENST00000434048 306 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 MTND3P1-201ENST00000441336 220 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 RPL7P59-201ENST00000447700 943 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 RNU7-125P-201ENST00000458760 62 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 RPL5P24-201ENST00000463742 885 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 AC104689.1-201ENST00000473356 768 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 TMED11P-201ENST00000479478 690 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 RN7SL283P-201ENST00000489055 303 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 AC008885.2-201ENST00000509506 930 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 AC048346.1-201ENST00000510247 144 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 AC079395.1-201ENST00000510981 262 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 AC005832.3-201ENST00000537929 631 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 PIGPP4-201ENST00000584447 307 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 AC113194.1-201ENST00000606037 500 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 AC131235.4-201ENST00000609288 620 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 AC105429.2-201ENST00000610567 517 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.96□□□□□ -1.78
UPF2Q9HAU5 XIST_intron.1-201ENST00000619444 68 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 SNORA50A-202ENST00000629536 136 ntBASIC3.96□□□□□ -1.78
UPF2Q9HAU5 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AF127577.6-201ENST00000623352 2191 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AC046144.1-201ENST00000478559 1853 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AL391994.1-201ENST00000254724 282 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 RNA5SP119-201ENST00000362715 117 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AL359837.1-201ENST00000381357 287 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 RNU6-1151P-201ENST00000384684 107 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 MIR153-1-201ENST00000384914 90 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 RPL21P17-201ENST00000397467 475 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 MIR1302-8-201ENST00000408342 128 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 RNA5SP229-201ENST00000410809 99 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 NUP35P2-201ENST00000416748 943 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AC005345.1-201ENST00000431868 217 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 USP9YP22-201ENST00000438971 294 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 MTCYBP3-201ENST00000445588 1137 ntBASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.95□□□□□ -1.78
UPF2Q9HAU5 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms