Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC090686.1-201ENST00000481577 749 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 AC026427.2-201ENST00000506228 536 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 SNORA40.12-201ENST00000516329 111 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 AC023632.4-201ENST00000517783 191 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 COX6CP8-201ENST00000522620 226 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 HMGB1P6-201ENST00000569046 646 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 RN7SL703P-201ENST00000578485 302 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 AC116312.1-201ENST00000606841 314 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 AL133215.3-201ENST00000609801 448 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 MIR554-201ENST00000384874 96 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 TXNP7-201ENST00000406296 293 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 CYCSP19-201ENST00000411715 316 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 VTI1BP4-201ENST00000427516 527 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 AL606489.2-201ENST00000433886 234 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 AC016691.1-201ENST00000441321 413 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 AC090602.1-201ENST00000469695 252 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 RPL31P50-201ENST00000471002 296 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 RN7SL132P-201ENST00000478131 296 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 UBA52P3-201ENST00000491303 382 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 AC034222.1-201ENST00000494052 532 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 AC022616.6-201ENST00000520479 119 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 AC087241.2-201ENST00000535801 324 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 MIR4286-201ENST00000580651 93 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 AL355802.3-201ENST00000607571 545 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 AC105429.2-201ENST00000610567 517 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 RMST_7.1-201ENST00000621935 268 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 AL356585.4-201ENST00000623078 1229 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 AC139769.1-204ENST00000472297 1931 ntBASIC5.6□□□□□ -1.51
CNTNAP4Q9C0A0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 Y_RNA.128-201ENST00000363391 112 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 Y_RNA.132-201ENST00000363421 102 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 RNA5SP513-201ENST00000364648 118 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 RNU6-108P-201ENST00000365558 107 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 MIR606-201ENST00000384851 96 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 U3.23-201ENST00000391132 200 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 RNU6-952P-201ENST00000391164 108 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 BTBD10P2-201ENST00000404779 676 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 AC018644.1-201ENST00000429934 551 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 RPS26P40-201ENST00000435209 294 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 MRPL50P4-201ENST00000446432 475 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 MTND4LP22-201ENST00000508209 276 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 AC110792.2-201ENST00000510278 224 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 RNA5SP143-201ENST00000516936 115 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 OR5B19P-201ENST00000531766 928 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms