Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 RNU6-89P-201ENST00000606519 100 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC130324.3-201ENST00000614165 542 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 uc_338.12-201ENST00000616344 181 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC000123.3-201ENST00000624029 4975 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 SNORA17.1-201ENST00000362945 126 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 SNORA73.1-201ENST00000363107 205 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 Y_RNA.259-201ENST00000364619 101 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 RNU6-43P-201ENST00000384302 107 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 RNU6-1207P-201ENST00000384343 107 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 MIR559-201ENST00000385188 96 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 Y_RNA.579-201ENST00000390939 94 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 Y_RNA.615-201ENST00000410769 117 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 CHEK2P3-201ENST00000416118 248 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 ERLEC1P1-201ENST00000433806 578 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 RPS20P5-201ENST00000434808 360 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 Z92846.1-201ENST00000456203 268 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 PPP1R2P5-201ENST00000457256 603 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 snoU13.20-201ENST00000459180 104 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 RPS17P2-201ENST00000461663 408 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 RN7SL346P-201ENST00000491561 294 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AC105417.1-201ENST00000514691 285 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 RNU4-29P-201ENST00000515943 174 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 RN7SKP147-201ENST00000517154 244 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AP001922.4-201ENST00000526967 290 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AP003497.1-201ENST00000528472 562 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AC107918.3-201ENST00000533272 382 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AC092490.3-201ENST00000545370 572 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AC026464.5-201ENST00000562497 722 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 AC068790.3-201ENST00000602988 553 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 OR6R2P-201ENST00000609216 300 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXP3Q9BZS1 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.15□□□□□ -1.58
FOXP3Q9BZS1 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
FOXP3Q9BZS1 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.15□□□□□ -1.58
FOXP3Q9BZS1 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
FOXP3Q9BZS1 AL450326.2-201ENST00000421913 1962 ntBASIC5.15□□□□□ -1.58
FOXP3Q9BZS1 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
FOXP3Q9BZS1 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
FOXP3Q9BZS1 AC073343.1-201ENST00000328239 651 ntBASIC5.15□□□□□ -1.59
FOXP3Q9BZS1 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
FOXP3Q9BZS1 Y_RNA.100-201ENST00000363141 102 ntBASIC5.15□□□□□ -1.59
FOXP3Q9BZS1 Y_RNA.216-201ENST00000364205 93 ntBASIC5.15□□□□□ -1.59
FOXP3Q9BZS1 Y_RNA.234-201ENST00000364409 97 ntBASIC5.15□□□□□ -1.59
FOXP3Q9BZS1 Y_RNA.367-201ENST00000365544 101 ntBASIC5.15□□□□□ -1.59
FOXP3Q9BZS1 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
FOXP3Q9BZS1 RNU6-474P-201ENST00000384243 107 ntBASIC5.15□□□□□ -1.59
FOXP3Q9BZS1 MIR92A2-201ENST00000385299 75 ntBASIC5.15□□□□□ -1.59
FOXP3Q9BZS1 RN7SKP235-201ENST00000410662 305 ntBASIC5.15□□□□□ -1.59
FOXP3Q9BZS1 AL451054.2-201ENST00000420896 202 ntBASIC5.15□□□□□ -1.59
FOXP3Q9BZS1 HSPE1P1-201ENST00000421494 318 ntBASIC5.15□□□□□ -1.59
FOXP3Q9BZS1 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.15□□□□□ -1.59
FOXP3Q9BZS1 FABP7P2-201ENST00000429946 379 ntBASIC5.15□□□□□ -1.59
FOXP3Q9BZS1 GPM6BP2-201ENST00000432046 144 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms