Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 MTCO2P32-201ENST00000514865 403 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 RN7SKP116-201ENST00000516902 319 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AC007991.1-201ENST00000522680 631 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AP002748.2-201ENST00000528671 348 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AC005771.1-201ENST00000585581 349 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 BNIP3P33-201ENST00000598912 569 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 CRYM-AS1-204ENST00000637983 556 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 TEX21P-201ENST00000447107 1476 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AP002001.2-201ENST00000529025 1469 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AL049780.3-201ENST00000624612 1583 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AC090229.1-201ENST00000590983 1609 ntBASIC4.21□□□□□ -1.73
PAAF1Q9BRP4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 RNY4P24-201ENST00000362735 96 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 RNU6-356P-201ENST00000384140 107 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 RNU6-339P-201ENST00000384310 107 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 Y_RNA.517-201ENST00000384551 106 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 RNU2-16P-201ENST00000410712 136 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 HMGN1P14-201ENST00000412459 517 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 USP9YP13-201ENST00000417797 480 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC005517.2-201ENST00000424673 553 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC007742.1-201ENST00000425789 329 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AL445669.1-201ENST00000426743 755 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 MTCYBP45-201ENST00000435243 565 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 ELOCP26-201ENST00000436067 329 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 RSU1P2-202ENST00000437884 485 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 RPL23AP33-201ENST00000442301 452 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 RPL29P29-201ENST00000448725 423 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC099563.1-201ENST00000456086 418 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 RPL21P103-201ENST00000479921 488 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AP003392.2-201ENST00000527269 208 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 OR4P1P-201ENST00000530808 1136 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 CYCSP30-201ENST00000546447 172 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AL391156.1-201ENST00000554965 554 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 CYP4A43P-201ENST00000568156 121 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 MIR5697-201ENST00000578045 78 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC087683.1-201ENST00000591187 441 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC078795.2-201ENST00000602835 1252 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC006329.2-201ENST00000611491 394 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC013562.2-201ENST00000611632 603 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC008121.2-201ENST00000614647 523 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC008250.2-201ENST00000615261 205 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC131238.1-201ENST00000617135 328 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC009509.4-201ENST00000619202 509 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AL139089.1-201ENST00000620372 975 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AP006248.2-201ENST00000623309 592 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 AC000123.3-201ENST00000624029 4975 ntBASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PAAF1Q9BRP4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 MAPK10-320ENST00000641462 6696 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 U1.1-201ENST00000384101 164 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 RNU6-761P-201ENST00000384148 107 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 RPS12P5-201ENST00000423449 371 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 Z74696.2-201ENST00000436514 498 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AC083863.1-201ENST00000438811 231 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms