Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.8□□□□□ -1.96
VAT1Q99536 YPEL5P1-201ENST00000419731 367 ntBASIC2.8□□□□□ -1.96
VAT1Q99536 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.8□□□□□ -1.96
VAT1Q99536 AC073508.1-201ENST00000428866 656 ntBASIC2.8□□□□□ -1.96
VAT1Q99536 YWHAZP7-201ENST00000436906 631 ntBASIC2.8□□□□□ -1.96
VAT1Q99536 AC093156.1-201ENST00000440382 670 ntBASIC2.8□□□□□ -1.96
VAT1Q99536 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.8□□□□□ -1.96
VAT1Q99536 HIGD1AP6-201ENST00000521833 279 ntBASIC2.8□□□□□ -1.96
VAT1Q99536 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.8□□□□□ -1.96
VAT1Q99536 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.8□□□□□ -1.96
VAT1Q99536 XIAPP1-201ENST00000603162 600 ntBASIC2.8□□□□□ -1.96
VAT1Q99536 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.8□□□□□ -1.96
VAT1Q99536 MIR6733-201ENST00000635723 61 ntBASIC2.8□□□□□ -1.96
VAT1Q99536 AC009487.2-201ENST00000420969 6821 ntBASIC2.8□□□□□ -1.96
VAT1Q99536 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VAT1Q99536 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.79□□□□□ -1.96
VAT1Q99536 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VAT1Q99536 AL645568.2-201ENST00000432815 1337 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 RNA5SP258-201ENST00000362750 119 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 RNU6-989P-201ENST00000362756 107 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VAT1Q99536 RNU6-444P-201ENST00000383988 108 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 AL591034.1-201ENST00000407447 340 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 RNA5SP21-201ENST00000410917 96 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 UBE2V1P9-201ENST00000414760 368 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 MRPL50P2-201ENST00000416821 482 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.79□□□□□ -1.96
VAT1Q99536 MUPP-201ENST00000438111 566 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.79□□□□□ -1.96
VAT1Q99536 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.79□□□□□ -1.96
VAT1Q99536 RPL17P49-201ENST00000443728 411 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.79□□□□□ -1.96
VAT1Q99536 AC093392.2-201ENST00000450682 337 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 BX248409.1-201ENST00000455497 255 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.79□□□□□ -1.96
VAT1Q99536 AC010301.1-201ENST00000473936 355 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 AC103975.1-201ENST00000482506 483 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 RN7SL297P-201ENST00000483161 293 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.79□□□□□ -1.96
VAT1Q99536 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.79□□□□□ -1.96
VAT1Q99536 AC026427.2-201ENST00000506228 536 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 AC004062.1-201ENST00000509926 645 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.79□□□□□ -1.96
VAT1Q99536 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.79□□□□□ -1.96
VAT1Q99536 OR4A45P-201ENST00000529954 901 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.79□□□□□ -1.96
VAT1Q99536 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.79□□□□□ -1.96
VAT1Q99536 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
VAT1Q99536 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.79□□□□□ -1.96
VAT1Q99536 GTF2IP8-201ENST00000560687 584 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 AL157394.1-201ENST00000562983 1224 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 AC087481.2-201ENST00000565492 330 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.79□□□□□ -1.96
VAT1Q99536 AC013468.1-201ENST00000608680 598 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 AL163051.2-201ENST00000618976 735 ntBASIC2.79□□□□□ -1.96
VAT1Q99536 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VAT1Q99536 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VAT1Q99536 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
VAT1Q99536 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
VAT1Q99536 AL161431.1-201ENST00000618966 4205 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VAT1Q99536 ASNSP3-201ENST00000451989 1306 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.78□□□□□ -1.96
VAT1Q99536 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VAT1Q99536 RNU6-883P-201ENST00000384597 107 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 MIR9-1-201ENST00000385198 89 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
VAT1Q99536 AL138827.1-201ENST00000402666 306 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 ATF1P1-201ENST00000406040 927 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 AL354719.1-201ENST00000406535 843 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 AL158825.1-201ENST00000414735 521 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.78□□□□□ -1.96
VAT1Q99536 AC006548.1-201ENST00000427470 102 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 AC093422.3-201ENST00000428506 305 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 AC087499.2-201ENST00000432861 149 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.78□□□□□ -1.96
VAT1Q99536 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.78□□□□□ -1.96
VAT1Q99536 AL034418.1-201ENST00000448675 860 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.78□□□□□ -1.96
VAT1Q99536 GSTA11P-201ENST00000452866 669 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.78□□□□□ -1.96
VAT1Q99536 HMGN2P13-201ENST00000476476 274 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.78□□□□□ -1.96
VAT1Q99536 OR5H5P-201ENST00000503164 928 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 SNORA74D-201ENST00000516404 141 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 AL133271.1-201ENST00000538229 291 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.78□□□□□ -1.96
VAT1Q99536 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.78□□□□□ -1.96
VAT1Q99536 AC010653.1-201ENST00000571108 881 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.78□□□□□ -1.96
VAT1Q99536 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.78□□□□□ -1.96
VAT1Q99536 AC023043.3-201ENST00000593113 385 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 AC078899.3-201ENST00000599065 212 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 AC025588.3-201ENST00000604182 274 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 AC016542.1-201ENST00000608259 493 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 AL110115.1-201ENST00000614396 364 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 CR381572.1-201ENST00000625098 102 ntBASIC2.78□□□□□ -1.96
VAT1Q99536 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.78□□□□□ -1.96
VAT1Q99536 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
VAT1Q99536 TAB3P1-202ENST00000452645 1634 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms