Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS50Q96JG6 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS50Q96JG6 ACTR3P3-201ENST00000480448 893 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 MTCO3P44-201ENST00000510977 541 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 RN7SKP234-201ENST00000517173 224 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 AP003122.4-201ENST00000530980 758 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 MTATP6P3-201ENST00000581686 676 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 VN1R79P-201ENST00000593540 513 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC110741.2-201ENST00000605278 268 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 RNA5SP108-201ENST00000605921 117 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 AL031666.3-201ENST00000609320 1006 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC012409.3-201ENST00000611343 981 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC138749.5-201ENST00000611461 208 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC092794.1-201ENST00000612734 582 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC091834.1-201ENST00000614543 472 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC116165.2-201ENST00000616705 206 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC099654.12-201ENST00000639868 649 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 MTND5P26-201ENST00000426018 1752 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS50Q96JG6 AL049780.3-201ENST00000624612 1583 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 FAM35DP-201ENST00000323387 2712 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 LINC02471-203ENST00000641941 4752 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS50Q96JG6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS50Q96JG6 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS50Q96JG6 MAPK10-372ENST00000641954 3413 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 NXPH1-205ENST00000602349 1953 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS50Q96JG6 NMD3P1-201ENST00000439704 1488 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS50Q96JG6 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS50Q96JG6 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 Y_RNA.6-201ENST00000362350 114 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 RNU6-28P-201ENST00000362378 107 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 RNU1-130P-201ENST00000363930 160 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 RNU6-853P-201ENST00000364306 107 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 RNA5SP509-201ENST00000364577 119 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS50Q96JG6 RPS3AP3-201ENST00000411933 242 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 FCF1P9-201ENST00000412546 282 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 RAD23BP2-201ENST00000416003 1207 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 MTATP6P27-201ENST00000416987 621 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 AC012065.2-201ENST00000421295 375 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 BX890604.2-201ENST00000427883 474 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 OR2B8P-201ENST00000432841 938 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 FAM103A2P-201ENST00000444122 354 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 AL359893.1-201ENST00000447628 1580 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 RN7SL303P-201ENST00000469773 251 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 AL358832.1-201ENST00000497800 389 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 AC005798.1-201ENST00000513715 387 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 MTND4LP26-201ENST00000518144 282 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS50Q96JG6 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 AC137800.2-201ENST00000574375 120 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 OR4G1P-201ENST00000588632 938 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 TPMTP1-201ENST00000592307 737 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 RPL23AP92-201ENST00000603609 255 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 AC090578.1-201ENST00000604955 591 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 AC010201.1-201ENST00000605051 540 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 AL513477.2-201ENST00000607858 568 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 AL713922.2-201ENST00000619384 716 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 AL160394.1-201ENST00000624765 724 ntBASIC4.25□□□□□ -1.73
VPS50Q96JG6 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms