Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RPS24P7-201ENST00000416921 246 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC083875.1-201ENST00000419509 405 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 MTCO2P21-201ENST00000419780 677 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 RPL27AP8-201ENST00000424277 446 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 MTND1P32-201ENST00000433043 938 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC092754.2-201ENST00000463506 460 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 RPS23P7-201ENST00000466210 444 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 VN1R104P-201ENST00000505115 1009 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 ARL2BPP6-201ENST00000512757 439 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC107952.2-201ENST00000606048 486 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC011330.2-201ENST00000621680 635 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 PLCE1P1-201ENST00000622094 305 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC079228.1-201ENST00000624774 1049 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 U6.98-201ENST00000637157 84 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC138915.3-201ENST00000562908 1389 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 ZNF826P-207ENST00000622273 1910 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 RPL7P26-201ENST00000333817 754 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 RNU6-931P-201ENST00000363850 107 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 MIR184-201ENST00000384962 84 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 EI24P2-201ENST00000397776 1076 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AL590704.1-201ENST00000402856 794 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC002075.2-201ENST00000425207 252 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 MTATP6P4-201ENST00000427725 675 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC024082.2-201ENST00000434771 238 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 HMGN2P20-201ENST00000437531 273 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 TXNP1-201ENST00000441872 371 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 EEF1E1P1-201ENST00000446998 430 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 PAXBP1P1-201ENST00000449315 447 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC234775.1-201ENST00000454247 670 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 RPS3AP6-201ENST00000484430 795 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC026784.1-201ENST00000507986 352 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC022695.1-201ENST00000522089 237 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC008489.1-201ENST00000524271 483 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 HSPE1P5-201ENST00000561489 272 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 MIR4474-201ENST00000579189 78 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC023575.1-201ENST00000580510 358 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC025588.2-201ENST00000604851 466 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 RNU6-88P-201ENST00000606801 100 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AL136981.2-201ENST00000617319 734 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AF117829.1-206ENST00000621883 3802 ntBASIC3.6□□□□□ -1.83
VPS33AQ96AX1 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
VPS33AQ96AX1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms