Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
CCDC47Q96A33 AC008507.1-201ENST00000587506 734 ntBASIC3.69□□□□□ -1.82
CCDC47Q96A33 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC47Q96A33 AC106900.2-201ENST00000604994 317 ntBASIC3.69□□□□□ -1.82
CCDC47Q96A33 U3.45-201ENST00000607547 219 ntBASIC3.69□□□□□ -1.82
CCDC47Q96A33 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC47Q96A33 AC106028.5-201ENST00000610332 395 ntBASIC3.69□□□□□ -1.82
CCDC47Q96A33 AL157817.1-201ENST00000614264 790 ntBASIC3.69□□□□□ -1.82
CCDC47Q96A33 AP000943.4-201ENST00000622912 357 ntBASIC3.69□□□□□ -1.82
CCDC47Q96A33 AC127502.3-201ENST00000636170 1206 ntBASIC3.69□□□□□ -1.82
CCDC47Q96A33 AC087821.2-201ENST00000637086 450 ntBASIC3.69□□□□□ -1.82
CCDC47Q96A33 AL392088.2-201ENST00000637607 285 ntBASIC3.69□□□□□ -1.82
CCDC47Q96A33 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.69□□□□□ -1.82
CCDC47Q96A33 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CCDC47Q96A33 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC47Q96A33 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC47Q96A33 AL356274.2-201ENST00000624379 3752 ntBASIC3.68□□□□□ -1.82
CCDC47Q96A33 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC47Q96A33 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CCDC47Q96A33 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC47Q96A33 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC47Q96A33 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC47Q96A33 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
CCDC47Q96A33 RPL36AP36-201ENST00000418616 301 ntBASIC3.68□□□□□ -1.82
CCDC47Q96A33 OR1AA1P-201ENST00000419597 916 ntBASIC3.68□□□□□ -1.82
CCDC47Q96A33 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC47Q96A33 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC47Q96A33 AC013262.1-201ENST00000426710 252 ntBASIC3.68□□□□□ -1.82
CCDC47Q96A33 RPL23AP22-201ENST00000437556 453 ntBASIC3.68□□□□□ -1.82
CCDC47Q96A33 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC47Q96A33 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC47Q96A33 VN1R10P-201ENST00000447106 875 ntBASIC3.68□□□□□ -1.82
CCDC47Q96A33 AL359073.1-201ENST00000448036 403 ntBASIC3.68□□□□□ -1.82
CCDC47Q96A33 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC47Q96A33 AC092757.1-201ENST00000467293 467 ntBASIC3.68□□□□□ -1.82
CCDC47Q96A33 AC092902.1-201ENST00000486999 259 ntBASIC3.68□□□□□ -1.82
CCDC47Q96A33 KLRA1P-201ENST00000503499 986 ntBASIC3.68□□□□□ -1.82
CCDC47Q96A33 CBX3P3-201ENST00000508108 532 ntBASIC3.68□□□□□ -1.82
CCDC47Q96A33 RNA5SP217-201ENST00000515959 91 ntBASIC3.68□□□□□ -1.82
CCDC47Q96A33 RN7SKP282-201ENST00000516824 299 ntBASIC3.68□□□□□ -1.82
CCDC47Q96A33 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC47Q96A33 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC47Q96A33 DNAJC8P1-201ENST00000554535 372 ntBASIC3.68□□□□□ -1.82
CCDC47Q96A33 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC47Q96A33 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC47Q96A33 MIR5186-201ENST00000577504 120 ntBASIC3.68□□□□□ -1.82
CCDC47Q96A33 MIR4276-201ENST00000584832 70 ntBASIC3.68□□□□□ -1.82
CCDC47Q96A33 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC47Q96A33 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC47Q96A33 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC47Q96A33 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC47Q96A33 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC47Q96A33 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC47Q96A33 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
CCDC47Q96A33 API5P2-201ENST00000397055 1498 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC47Q96A33 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC47Q96A33 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
CCDC47Q96A33 U3.11-201ENST00000364476 212 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC47Q96A33 MIR200C-201ENST00000384980 68 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC47Q96A33 SSXP9-201ENST00000417503 292 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC47Q96A33 GTF2IP23-201ENST00000423746 351 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC47Q96A33 MTCO1P39-201ENST00000426148 480 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 NIPA2P1-201ENST00000426223 976 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC47Q96A33 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC47Q96A33 AC115115.1-201ENST00000449927 248 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC47Q96A33 AC091564.1-201ENST00000464563 479 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC47Q96A33 AC008837.1-201ENST00000511513 412 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC47Q96A33 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
CCDC47Q96A33 AC068657.1-201ENST00000520807 306 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 MTCO3P15-201ENST00000526563 574 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 AP003066.2-201ENST00000529375 555 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC47Q96A33 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC47Q96A33 AP005205.1-201ENST00000563503 508 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC47Q96A33 AC053481.3-201ENST00000577881 843 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC47Q96A33 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC47Q96A33 AP001521.1-201ENST00000609150 300 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 AL591516.1-201ENST00000611326 274 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 AL592148.2-201ENST00000612210 372 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC47Q96A33 Z83843.1-201ENST00000604070 3685 ntBASIC3.67□□□□□ -1.82
CCDC47Q96A33 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CCDC47Q96A33 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC47Q96A33 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC47Q96A33 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC47Q96A33 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCDC47Q96A33 RNU6-878P-201ENST00000384578 110 ntBASIC3.66□□□□□ -1.82
CCDC47Q96A33 SNORA1.3-201ENST00000384676 136 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms