Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RNA5SP164-201ENST00000516533 110 ntBASIC3.65□□□□□ -1.83
TM9SF4Q92544 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.65□□□□□ -1.83
TM9SF4Q92544 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.65□□□□□ -1.83
TM9SF4Q92544 OR6C7P-201ENST00000547875 934 ntBASIC3.65□□□□□ -1.83
TM9SF4Q92544 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.65□□□□□ -1.83
TM9SF4Q92544 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.65□□□□□ -1.83
TM9SF4Q92544 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.65□□□□□ -1.83
TM9SF4Q92544 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.65□□□□□ -1.83
TM9SF4Q92544 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.65□□□□□ -1.83
TM9SF4Q92544 AC008507.1-201ENST00000587506 734 ntBASIC3.65□□□□□ -1.83
TM9SF4Q92544 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.65□□□□□ -1.83
TM9SF4Q92544 AC073544.2-201ENST00000601155 540 ntBASIC3.65□□□□□ -1.83
TM9SF4Q92544 AC068790.2-201ENST00000602601 557 ntBASIC3.65□□□□□ -1.83
TM9SF4Q92544 AC025165.5-201ENST00000602802 578 ntBASIC3.65□□□□□ -1.83
TM9SF4Q92544 MTCYBP22-201ENST00000603788 447 ntBASIC3.65□□□□□ -1.83
TM9SF4Q92544 AC091167.4-201ENST00000605079 184 ntBASIC3.65□□□□□ -1.83
TM9SF4Q92544 AC106028.5-201ENST00000610332 395 ntBASIC3.65□□□□□ -1.83
TM9SF4Q92544 HULC.1-201ENST00000612720 240 ntBASIC3.65□□□□□ -1.83
TM9SF4Q92544 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TM9SF4Q92544 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TM9SF4Q92544 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
TM9SF4Q92544 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.65□□□□□ -1.83
TM9SF4Q92544 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TM9SF4Q92544 HSPA8P1-201ENST00000425843 1833 ntBASIC3.65□□□□□ -1.83
TM9SF4Q92544 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TM9SF4Q92544 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
TM9SF4Q92544 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
TM9SF4Q92544 ZNF37BP-203ENST00000452306 1352 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 DDX43P2-201ENST00000604753 1354 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TM9SF4Q92544 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC007685.1-201ENST00000329806 452 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 SNORA63.1-201ENST00000362493 131 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 U3.4-201ENST00000363352 213 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TM9SF4Q92544 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
TM9SF4Q92544 RNU6-1122P-201ENST00000384449 107 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC004022.2-201ENST00000413824 193 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC092832.1-201ENST00000422934 400 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 NPM1P34-201ENST00000428821 893 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 TRIM60P18-201ENST00000441518 828 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 MTCO1P19-201ENST00000443487 500 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 PDSS1P2-201ENST00000449397 678 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 RPS11P1-201ENST00000451072 473 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 RN7SL93P-201ENST00000463035 293 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC091965.2-201ENST00000512324 613 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 RN7SKP82-201ENST00000516786 223 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 ARL2BPP5-201ENST00000523141 481 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 DEFB131D-201ENST00000526803 184 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 SULT1C2P1-202ENST00000562418 459 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC074051.3-201ENST00000570238 358 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 LARP7P2-201ENST00000575306 125 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC012213.3-201ENST00000577199 777 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC092354.1-201ENST00000606057 376 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 AL121772.2-201ENST00000614331 297 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 MIR7844-201ENST00000616161 122 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC018816.2-201ENST00000621460 353 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 FP236240.3-201ENST00000623061 327 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC079228.1-201ENST00000624774 1049 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC090582.1-201ENST00000636321 199 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 AC117529.2-201ENST00000512159 2068 ntBASIC3.64□□□□□ -1.83
TM9SF4Q92544 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TM9SF4Q92544 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.64□□□□□ -1.83
TM9SF4Q92544 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TM9SF4Q92544 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TM9SF4Q92544 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.63□□□□□ -1.83
TM9SF4Q92544 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TM9SF4Q92544 IPO8P1-201ENST00000455509 3109 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 RNU1-18P-201ENST00000363062 164 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 RNU6-623P-201ENST00000363143 105 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 SNORA70.4-201ENST00000365509 134 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms