Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC106734.1-201ENST00000568646 663 ntBASIC3.88□□□□□ -1.79
SNED1Q8TER0 DPRXP5-201ENST00000604662 539 ntBASIC3.88□□□□□ -1.79
SNED1Q8TER0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.88□□□□□ -1.79
SNED1Q8TER0 AC010975.3-201ENST00000618727 978 ntBASIC3.88□□□□□ -1.79
SNED1Q8TER0 AL590240.3-201ENST00000621416 943 ntBASIC3.88□□□□□ -1.79
SNED1Q8TER0 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.88□□□□□ -1.79
SNED1Q8TER0 AP003072.4-201ENST00000624580 310 ntBASIC3.88□□□□□ -1.79
SNED1Q8TER0 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.88□□□□□ -1.79
SNED1Q8TER0 AC090582.1-201ENST00000636321 199 ntBASIC3.88□□□□□ -1.79
SNED1Q8TER0 MIR622-201ENST00000638396 96 ntBASIC3.88□□□□□ -1.79
SNED1Q8TER0 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SNED1Q8TER0 SGO1P1-201ENST00000603525 1447 ntBASIC3.88□□□□□ -1.79
SNED1Q8TER0 MTCO1P24-201ENST00000515438 1558 ntBASIC3.88□□□□□ -1.79
SNED1Q8TER0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNED1Q8TER0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.88□□□□□ -1.79
SNED1Q8TER0 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SNED1Q8TER0 RIOK3P1-201ENST00000418778 1528 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC027287.1-201ENST00000553115 1453 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNED1Q8TER0 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC062016.1-201ENST00000355719 319 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 Y_RNA.194-201ENST00000363985 102 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 MTND4P20-201ENST00000424125 869 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC234781.2-201ENST00000426370 994 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SNED1Q8TER0 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC087312.1-201ENST00000471411 480 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC026414.1-201ENST00000504046 698 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 MTCO3P7-201ENST00000510008 774 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 RN7SKP132-201ENST00000516001 208 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 SNORA70.19-201ENST00000516717 90 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC107934.2-201ENST00000518653 310 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC027309.2-201ENST00000520566 192 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC134698.4-201ENST00000523451 826 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC087897.1-201ENST00000550134 156 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AL161713.1-201ENST00000555538 145 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 GTF3AP2-201ENST00000557014 266 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AL354943.1-201ENST00000572103 781 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC012213.3-201ENST00000577199 777 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 MIR4458-201ENST00000578872 75 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AL121895.2-201ENST00000619558 447 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC067852.7-201ENST00000623270 535 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 SAGE4P-201ENST00000442271 3381 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AL353743.4-201ENST00000422653 1547 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SNED1Q8TER0 MTND4P31-201ENST00000425607 1343 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 ZNF542P-204ENST00000482727 1305 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SNED1Q8TER0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNED1Q8TER0 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AP002088.1-201ENST00000382740 395 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 RNU6-224P-201ENST00000384055 107 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 Y_RNA.472-201ENST00000384322 102 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 RNU5A-2P-201ENST00000384337 116 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 Y_RNA.578-201ENST00000390903 88 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AL365203.2-201ENST00000423444 196 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 RPL7P28-201ENST00000437739 740 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 RPS27P5-201ENST00000444247 244 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC009961.3-201ENST00000449832 765 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AL096803.2-201ENST00000450032 677 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 MRPS31P2-201ENST00000451581 518 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 NPM1P13-201ENST00000452663 865 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 RPL23AP67-201ENST00000465341 474 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 RNU5A-4P-201ENST00000516588 111 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 MIR2276-201ENST00000516886 89 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 RPL12P22-201ENST00000519073 490 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC023813.2-201ENST00000564321 469 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 MIR4789-201ENST00000577469 82 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SNED1Q8TER0 AC006927.3-201ENST00000638789 384 ntBASIC3.87□□□□□ -1.79
SNED1Q8TER0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNED1Q8TER0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms