Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AC139769.1-204ENST00000472297 1931 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 RNU1-14P-201ENST00000362759 152 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 RNA5SP387-201ENST00000364226 106 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 Y_RNA.535-201ENST00000384612 99 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 RPL21P65-201ENST00000406094 466 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 RNU6-195P-201ENST00000411352 109 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 NUP35P2-201ENST00000416748 943 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AL590609.2-201ENST00000421430 368 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AC010881.1-201ENST00000433830 235 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AL031663.1-201ENST00000437445 219 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 MRPL48P1-201ENST00000445390 636 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AC022431.1-201ENST00000450941 438 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AC112204.1-201ENST00000502591 103 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 Y_RNA.693-201ENST00000516641 110 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 OR8L1P-201ENST00000534005 955 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 RN7SL703P-201ENST00000578485 302 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AC044792.1-201ENST00000593294 196 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AC005261.5-201ENST00000596280 355 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AL008729.2-201ENST00000606393 473 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AC128687.2-201ENST00000609657 566 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 FAM27D1-201ENST00000612308 341 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AC009033.1-201ENST00000624279 431 ntBASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A3Q8N4M1 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
SLC44A3Q8N4M1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
SLC44A3Q8N4M1 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.46□□□□□ -1.69
SLC44A3Q8N4M1 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 Y_RNA.1-201ENST00000352915 104 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 Y_RNA.160-201ENST00000363677 92 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 RNA5SP175-201ENST00000364275 119 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 Y_RNA.263-201ENST00000364659 114 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 Y_RNA.279-201ENST00000364763 95 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 Y_RNA.409-201ENST00000383990 98 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 MIR200C-201ENST00000384980 68 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 RNA5SP372-201ENST00000390836 115 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 SNORA68.2-201ENST00000391263 128 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 ENSAP1-201ENST00000392855 326 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 SNRPEP2-201ENST00000397592 279 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 RN7SKP247-201ENST00000411094 308 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 AMD1P2-201ENST00000412936 992 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 AC108032.1-201ENST00000416706 207 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 USP9YP27-201ENST00000418455 438 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 CKS1BP6-201ENST00000424932 240 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 RPS26P40-201ENST00000435209 294 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 SNRPEP7-201ENST00000438350 220 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 C1DP4-201ENST00000455429 424 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 MTCO1P42-201ENST00000457379 726 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 RPS15AP17-201ENST00000470598 390 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 AC017015.1-201ENST00000477387 286 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 AC022882.1-201ENST00000532142 501 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 AL512310.1-201ENST00000548639 172 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 SULT1C2P2-201ENST00000562517 294 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 MIR4637-201ENST00000582405 84 ntBASIC4.46□□□□□ -1.7
SLC44A3Q8N4M1 AC017100.2-201ENST00000584628 355 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms