Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.39□□□□□ -2.03
LRRC28Q86X40 RAD1P2-201ENST00000446414 663 ntBASIC2.39□□□□□ -2.03
LRRC28Q86X40 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.39□□□□□ -2.03
LRRC28Q86X40 NIPA2P5-201ENST00000452282 464 ntBASIC2.39□□□□□ -2.03
LRRC28Q86X40 GAPDHP39-201ENST00000481866 979 ntBASIC2.39□□□□□ -2.03
LRRC28Q86X40 SRIP1-201ENST00000489235 288 ntBASIC2.39□□□□□ -2.03
LRRC28Q86X40 AC025459.1-201ENST00000504072 156 ntBASIC2.39□□□□□ -2.03
LRRC28Q86X40 AC093770.1-201ENST00000511559 571 ntBASIC2.39□□□□□ -2.03
LRRC28Q86X40 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.39□□□□□ -2.03
LRRC28Q86X40 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.39□□□□□ -2.03
LRRC28Q86X40 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.39□□□□□ -2.03
LRRC28Q86X40 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.39□□□□□ -2.03
LRRC28Q86X40 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.39□□□□□ -2.03
LRRC28Q86X40 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.39□□□□□ -2.03
LRRC28Q86X40 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LRRC28Q86X40 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.39□□□□□ -2.03
LRRC28Q86X40 ZNF92P3-201ENST00000596594 954 ntBASIC2.39□□□□□ -2.03
LRRC28Q86X40 MIMT1-201ENST00000597105 1050 ntBASIC2.39□□□□□ -2.03
LRRC28Q86X40 AL137843.1-201ENST00000605078 385 ntBASIC2.39□□□□□ -2.03
LRRC28Q86X40 AL033523.1-201ENST00000605153 153 ntBASIC2.39□□□□□ -2.03
LRRC28Q86X40 AC008277.2-201ENST00000605196 797 ntBASIC2.39□□□□□ -2.03
LRRC28Q86X40 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.39□□□□□ -2.03
LRRC28Q86X40 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.39□□□□□ -2.03
LRRC28Q86X40 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
LRRC28Q86X40 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
LRRC28Q86X40 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.39□□□□□ -2.03
LRRC28Q86X40 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.39□□□□□ -2.03
LRRC28Q86X40 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LRRC28Q86X40 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LRRC28Q86X40 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
LRRC28Q86X40 AL365361.1-201ENST00000566942 3481 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 RNA5SP393-201ENST00000363423 117 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 MIR7-1-201ENST00000384871 110 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LRRC28Q86X40 AL122016.1-201ENST00000403365 367 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 NUP35P2-201ENST00000416748 943 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.38□□□□□ -2.03
LRRC28Q86X40 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.38□□□□□ -2.03
LRRC28Q86X40 AC025750.2-201ENST00000442609 450 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LRRC28Q86X40 AC010301.1-201ENST00000473936 355 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 SUMO1P1-201ENST00000497904 306 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.38□□□□□ -2.03
LRRC28Q86X40 RPS27P27-201ENST00000498779 255 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 AC091917.2-201ENST00000505002 744 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 RPPH1-2P-201ENST00000516688 293 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.38□□□□□ -2.03
LRRC28Q86X40 AC128657.1-201ENST00000549459 145 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 AL049870.4-201ENST00000555741 486 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.38□□□□□ -2.03
LRRC28Q86X40 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.38□□□□□ -2.03
LRRC28Q86X40 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.38□□□□□ -2.03
LRRC28Q86X40 AC009220.3-201ENST00000604318 586 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 AC245100.7-201ENST00000609678 442 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 AP004607.9-201ENST00000618202 316 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 SCARNA15.3-201ENST00000626315 122 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 SCARNA4.1-201ENST00000628597 123 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.38□□□□□ -2.03
LRRC28Q86X40 FO624990.1-201ENST00000636373 85 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 AC119674.1-220ENST00000641502 1048 ntBASIC2.38□□□□□ -2.03
LRRC28Q86X40 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LRRC28Q86X40 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LRRC28Q86X40 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
LRRC28Q86X40 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
LRRC28Q86X40 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
LRRC28Q86X40 SAGE4P-201ENST00000442271 3381 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.37□□□□□ -2.03
LRRC28Q86X40 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LRRC28Q86X40 RNU1-100P-201ENST00000365255 165 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 SNORA18.3-201ENST00000384122 132 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 RNU6-452P-201ENST00000384406 107 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 MIR142-201ENST00000384835 87 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 ARF4P3-201ENST00000397387 509 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 AL513477.1-202ENST00000417061 214 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
LRRC28Q86X40 AC073508.1-201ENST00000428866 656 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 SUMO1P4-201ENST00000429430 302 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 AC087499.2-201ENST00000432861 149 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 MRPS33P4-201ENST00000434892 317 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.37□□□□□ -2.03
LRRC28Q86X40 AC129850.1-201ENST00000436203 508 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.37□□□□□ -2.03
LRRC28Q86X40 AC096992.1-201ENST00000459808 709 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 AC126182.1-201ENST00000478134 357 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 KC877373.1-201ENST00000479066 408 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.37□□□□□ -2.03
LRRC28Q86X40 RNU1-103P-201ENST00000516502 125 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LRRC28Q86X40 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.37□□□□□ -2.03
LRRC28Q86X40 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC2.37□□□□□ -2.03
LRRC28Q86X40 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.37□□□□□ -2.03
LRRC28Q86X40 AC020895.1-201ENST00000595362 272 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 MTCO3P22-201ENST00000603219 784 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 AL049779.4-201ENST00000604500 156 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 VIS1.1-201ENST00000610517 203 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 AL110115.1-201ENST00000614396 364 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 AC008083.4-201ENST00000615076 444 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms