Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 NPM1P11-201ENST00000417106 855 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.04□□□□□ -1.76
NPHP3Q7Z494 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.04□□□□□ -1.76
NPHP3Q7Z494 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.04□□□□□ -1.76
NPHP3Q7Z494 CKS1BP5-201ENST00000434172 273 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 HMGB3P11-201ENST00000440127 604 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 AL645638.1-201ENST00000440519 361 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 AL929288.2-201ENST00000446368 407 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 SEPT14P24-201ENST00000447236 180 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 AL050341.1-201ENST00000447743 313 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.04□□□□□ -1.76
NPHP3Q7Z494 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.04□□□□□ -1.76
NPHP3Q7Z494 TVP23BP2-201ENST00000455082 615 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 UBL5P3-201ENST00000475112 231 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 TPT1P8-201ENST00000510120 555 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NPHP3Q7Z494 SCARNA1-201ENST00000517138 166 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 OR8L1P-201ENST00000534005 955 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.04□□□□□ -1.76
NPHP3Q7Z494 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.04□□□□□ -1.76
NPHP3Q7Z494 MIR4504-201ENST00000577413 92 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NPHP3Q7Z494 AC068722.2-201ENST00000618734 544 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NPHP3Q7Z494 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPHP3Q7Z494 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPHP3Q7Z494 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPHP3Q7Z494 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPHP3Q7Z494 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPHP3Q7Z494 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NPHP3Q7Z494 RNU6-77P-201ENST00000410554 91 ntBASIC4.03□□□□□ -1.76
NPHP3Q7Z494 RNU2-52P-201ENST00000410680 190 ntBASIC4.03□□□□□ -1.76
NPHP3Q7Z494 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.03□□□□□ -1.76
NPHP3Q7Z494 CDC42P1-201ENST00000456658 548 ntBASIC4.03□□□□□ -1.76
NPHP3Q7Z494 AC104164.3-201ENST00000467363 1258 ntBASIC4.03□□□□□ -1.76
NPHP3Q7Z494 RPS27P23-201ENST00000487608 251 ntBASIC4.03□□□□□ -1.76
NPHP3Q7Z494 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.03□□□□□ -1.76
NPHP3Q7Z494 AC010376.1-201ENST00000522101 334 ntBASIC4.03□□□□□ -1.76
NPHP3Q7Z494 AC021451.1-201ENST00000523498 1129 ntBASIC4.03□□□□□ -1.76
NPHP3Q7Z494 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NPHP3Q7Z494 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.03□□□□□ -1.76
NPHP3Q7Z494 VN1R87P-201ENST00000596706 487 ntBASIC4.03□□□□□ -1.76
NPHP3Q7Z494 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.03□□□□□ -1.76
NPHP3Q7Z494 YWHAQP7-201ENST00000603536 658 ntBASIC4.03□□□□□ -1.76
NPHP3Q7Z494 AC093673.2-201ENST00000609674 331 ntBASIC4.03□□□□□ -1.76
NPHP3Q7Z494 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPHP3Q7Z494 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
NPHP3Q7Z494 OR11H5P-202ENST00000641612 1325 ntBASIC4.03□□□□□ -1.76
NPHP3Q7Z494 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
NPHP3Q7Z494 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPHP3Q7Z494 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
NPHP3Q7Z494 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NPHP3Q7Z494 SNORA9.2-201ENST00000365361 133 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 MIR196B-201ENST00000384852 84 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 MIR34A-201ENST00000385130 110 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.02□□□□□ -1.77
NPHP3Q7Z494 RPL36P19-201ENST00000430744 301 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.02□□□□□ -1.77
NPHP3Q7Z494 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.02□□□□□ -1.77
NPHP3Q7Z494 USP9YP7-201ENST00000436723 430 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 AL513328.1-201ENST00000446460 224 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 RPL29P29-201ENST00000448725 423 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 RPL37P4-201ENST00000448908 268 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 USP9YP32-201ENST00000452432 430 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 snoU109.3-201ENST00000459477 145 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.02□□□□□ -1.77
NPHP3Q7Z494 RNU6-276P-201ENST00000516114 96 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 SCARNA20.6-201ENST00000517251 106 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 IGJP1-201ENST00000522682 475 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 RFPL1S-203ENST00000539579 330 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.02□□□□□ -1.77
NPHP3Q7Z494 MTCO1P40-201ENST00000574371 625 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NPHP3Q7Z494 AL590808.1-201ENST00000618696 141 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NPHP3Q7Z494 BX649567.1-201ENST00000642071 1134 ntBASIC4.02□□□□□ -1.77
NPHP3Q7Z494 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.02□□□□□ -1.77
NPHP3Q7Z494 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPHP3Q7Z494 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPHP3Q7Z494 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.02□□□□□ -1.77
NPHP3Q7Z494 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
NPHP3Q7Z494 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.01□□□□□ -1.77
NPHP3Q7Z494 RNU5E-10P-201ENST00000363506 118 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.01□□□□□ -1.77
NPHP3Q7Z494 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPHP3Q7Z494 SKINT1L-201ENST00000401057 817 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 RPL7P8-201ENST00000411964 730 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.01□□□□□ -1.77
NPHP3Q7Z494 MRPL50P2-201ENST00000416821 482 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 GLRXP1-201ENST00000423261 334 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 MTCO2P23-201ENST00000425216 680 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 RPL23AP33-201ENST00000442301 452 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 AC010095.1-201ENST00000443543 144 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 Z77249.1-201ENST00000444622 1175 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.01□□□□□ -1.77
NPHP3Q7Z494 AC026414.1-201ENST00000504046 698 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.01□□□□□ -1.77
NPHP3Q7Z494 AC093752.1-206ENST00000511823 336 ntBASIC4.01□□□□□ -1.77
NPHP3Q7Z494 AC016065.2-201ENST00000514530 444 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms