Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SNORA3.3-201ENST00000408712 125 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 RPS15AP38-201ENST00000413110 372 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AL592310.1-201ENST00000414330 671 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AC007390.1-201ENST00000415722 356 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 MTCYBP38-201ENST00000417160 1123 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 ELOCP9-201ENST00000418624 239 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 RPS25P9-201ENST00000435591 252 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AC098824.1-201ENST00000453565 980 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AC010460.1-201ENST00000507087 466 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AC093281.2-201ENST00000510153 597 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AC026402.1-201ENST00000513642 170 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 RNA5SP208-201ENST00000516156 78 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 HMGN1P28-201ENST00000521340 364 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 MTND2P32-201ENST00000521584 1038 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AP001372.4-201ENST00000524889 472 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AC023050.2-201ENST00000544968 387 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AC120057.2-201ENST00000571520 271 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AL606490.9-201ENST00000603331 271 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AC024941.1-201ENST00000612250 334 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AL022578.1-201ENST00000439330 1433 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AC005832.2-201ENST00000538921 1430 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 DEFB108F-201ENST00000344638 222 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 OR5H2-201ENST00000355273 945 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 RNU6-359P-201ENST00000365466 108 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 RPL23AP29-201ENST00000397284 453 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 RPS3AP26-201ENST00000398259 784 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AL445189.1-201ENST00000405722 338 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 SSR1P2-201ENST00000415208 787 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AC127526.1-201ENST00000417526 366 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 BMS1P19-201ENST00000433925 393 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AL590103.1-201ENST00000434488 307 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 MTND1P26-201ENST00000440488 538 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 CDC27P1-201ENST00000445384 715 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 RPL21P129-201ENST00000491732 478 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 RPL7P23-201ENST00000493874 747 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 RN7SL323P-201ENST00000494712 295 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 COX6CP8-201ENST00000522620 226 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 DEFB108D-201ENST00000527787 222 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AC084824.1-201ENST00000550917 1005 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AL121576.1-201ENST00000556055 276 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AC055876.1-202ENST00000567053 138 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 MIR3921-201ENST00000577308 85 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AL450336.1-201ENST00000605180 586 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 BRDTP1-201ENST00000605735 677 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AC008121.2-201ENST00000614647 523 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 MIR6875-201ENST00000617506 72 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AL161637.1-201ENST00000622380 412 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AL354798.1-201ENST00000622505 329 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms