Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 RNU6-280P-201ENST00000364145 104 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 Y_RNA.234-201ENST00000364409 97 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 RNU6-61P-201ENST00000365528 109 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 Y_RNA.478-201ENST00000384358 107 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 Y_RNA.506-201ENST00000384494 102 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 U3.20-201ENST00000390909 217 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 MIR1203-201ENST00000408812 85 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 RNU6-55P-201ENST00000411092 107 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 Z99755.1-201ENST00000414048 380 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 BX682237.1-201ENST00000415016 335 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 RPL31P45-201ENST00000419532 356 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 AL035660.1-201ENST00000422041 222 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 AL590233.1-201ENST00000430017 456 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 AL445665.1-202ENST00000452436 324 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 AC079804.1-201ENST00000461922 436 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 ENPP7P11-201ENST00000505915 627 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 SCARNA18.1-201ENST00000516330 83 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 RNU6-1332P-201ENST00000516666 104 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 Y_RNA.700-201ENST00000516806 100 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 MIR5188-201ENST00000583467 113 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 AC010620.2-201ENST00000600135 313 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 FAM27E4-201ENST00000605259 342 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 AC141002.1-201ENST00000607025 279 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 MIR6793-201ENST00000612376 63 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 uc_338.9-201ENST00000617424 182 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 AC091953.5-201ENST00000622919 233 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 AC083843.2-201ENST00000568248 6253 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 THAP12P9-201ENST00000503971 2360 ntBASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXR1Q6PIV2 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 Y_RNA.19-201ENST00000362462 99 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 Y_RNA.20-201ENST00000362479 113 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 RNU6-1287P-201ENST00000362914 107 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 RNU6-188P-201ENST00000364207 107 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 RN7SKP292-201ENST00000365522 317 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 Y_RNA.518-201ENST00000384552 113 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 RNU6-1060P-201ENST00000384664 107 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 RNU6-95P-201ENST00000384697 107 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 RNU6-493P-201ENST00000391321 108 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 AL359643.1-201ENST00000404109 423 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 AC096664.2-201ENST00000411843 406 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 AC013470.1-201ENST00000453438 462 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 SNORD5.1-201ENST00000458800 75 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 DYNLL1P5-201ENST00000467158 270 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 AC068305.1-201ENST00000497406 726 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 AC104806.1-201ENST00000508720 308 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 SNORA25.11-201ENST00000515935 105 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 AC090022.1-201ENST00000546569 311 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 AC127381.1-201ENST00000555979 939 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 AC007225.2-201ENST00000562529 256 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 RNF138P2-201ENST00000603490 592 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 AP000843.1-201ENST00000624880 701 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 MRE11P1-201ENST00000464884 2127 ntBASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.86□□□□□ -1.47
FOXR1Q6PIV2 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms