Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 SSXP10-201ENST00000402595 565 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AC007283.2-201ENST00000424739 197 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 IFNA20P-201ENST00000436840 528 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 RPS15AP9-201ENST00000439856 381 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AC078785.3-201ENST00000476607 425 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 RPS3AP50-201ENST00000487064 803 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AC055855.1-201ENST00000489563 579 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AC093767.1-201ENST00000504523 156 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AC026427.2-201ENST00000506228 536 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AC103851.1-201ENST00000506833 274 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AC068993.1-201ENST00000546724 589 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AC105224.1-201ENST00000587055 421 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 KC877982.1-201ENST00000602313 470 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AP000942.4-201ENST00000604811 241 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 ARF4P1-201ENST00000605447 541 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AC002550.2-201ENST00000621246 394 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 AC079684.1-201ENST00000621405 437 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 U3.53-201ENST00000628922 216 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 ZNF137P-201ENST00000456718 1920 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 Y_RNA.58-201ENST00000362807 102 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 RNU6-97P-201ENST00000363387 104 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 Y_RNA.154-201ENST00000363624 102 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 RNY3P1-201ENST00000365085 102 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 RNU6-996P-201ENST00000365438 107 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 RNY3-201ENST00000365484 102 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 RNU6-1226P-201ENST00000384317 107 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 Y_RNA.490-201ENST00000384413 102 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 MIR659-201ENST00000384963 97 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 AC069218.2-201ENST00000411665 344 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 RPL36AP36-201ENST00000418616 301 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 RPL23AP30-201ENST00000432419 501 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 AC236972.2-201ENST00000434979 310 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 H2AFZP5-201ENST00000446960 382 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 CACYBPP2-201ENST00000453625 678 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 RN7SL517P-201ENST00000462240 305 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 AC233702.1-201ENST00000482905 502 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 AC105417.1-201ENST00000514691 285 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 Y_RNA.719-201ENST00000517156 106 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 AP003497.1-201ENST00000528472 562 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 YWHAQP7-201ENST00000603536 658 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 AC090948.1-201ENST00000607464 549 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 AP005019.3-201ENST00000620418 560 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 AC009318.4-201ENST00000620496 486 ntBASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USPL1Q5W0Q7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 SOCS5P3-201ENST00000425115 1576 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AC097063.1-201ENST00000426714 1797 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AC009902.3-201ENST00000606235 2172 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AC009643.2-201ENST00000603543 1448 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AC021146.4-201ENST00000309229 279 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 Y_RNA.234-201ENST00000364409 97 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 Y_RNA.315-201ENST00000365117 102 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 MIR1-2-201ENST00000384961 85 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 SNORA48.7-201ENST00000391302 135 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 RPL6P29-201ENST00000414863 865 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 MTCO3P12-201ENST00000416718 547 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AL356387.2-201ENST00000422272 243 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms