Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.42□□□□□ -1.86
SCN1BQ07699 AL117351.1-201ENST00000438864 766 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 RSL24D1P3-201ENST00000449255 495 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 SNORD121B-201ENST00000458838 81 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 RNU7-170P-201ENST00000459303 61 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 RPL38P1-201ENST00000460914 211 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 UQCRHP4-201ENST00000471686 272 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 RPL31P60-201ENST00000478450 367 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 AC021382.1-201ENST00000483523 359 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 TRBV12-2-201ENST00000489763 344 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.42□□□□□ -1.86
SCN1BQ07699 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.42□□□□□ -1.86
SCN1BQ07699 SNORA31.9-201ENST00000516429 84 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 RNU6-711P-201ENST00000517255 106 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.42□□□□□ -1.86
SCN1BQ07699 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.42□□□□□ -1.86
SCN1BQ07699 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.42□□□□□ -1.86
SCN1BQ07699 DEFB108D-201ENST00000527787 222 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.42□□□□□ -1.86
SCN1BQ07699 AC090877.1-201ENST00000561418 344 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.42□□□□□ -1.86
SCN1BQ07699 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.42□□□□□ -1.86
SCN1BQ07699 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.42□□□□□ -1.86
SCN1BQ07699 AC114878.2-201ENST00000604863 1251 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 AP000254.1-201ENST00000609934 520 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 MIR6820-201ENST00000611508 62 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.42□□□□□ -1.86
SCN1BQ07699 AC006111.3-201ENST00000622137 383 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SCN1BQ07699 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SCN1BQ07699 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SCN1BQ07699 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.42□□□□□ -1.86
SCN1BQ07699 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.42□□□□□ -1.86
SCN1BQ07699 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SCN1BQ07699 CUL1P1-201ENST00000509510 2425 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SCN1BQ07699 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SCN1BQ07699 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.41□□□□□ -1.86
SCN1BQ07699 RNU6-359P-201ENST00000365466 108 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 RNU6-76P-201ENST00000384060 104 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 ANAPC10P1-201ENST00000395991 556 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.41□□□□□ -1.86
SCN1BQ07699 RPS4XP3-201ENST00000398541 413 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN1BQ07699 AL049693.1-201ENST00000402760 611 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 RNU6-1077P-201ENST00000410506 102 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 RNA5SP38-201ENST00000410750 119 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 TPT1P2-201ENST00000413105 503 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN1BQ07699 AL008987.1-201ENST00000415528 237 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SCN1BQ07699 AC083875.1-201ENST00000419509 405 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.41□□□□□ -1.86
SCN1BQ07699 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.41□□□□□ -1.86
SCN1BQ07699 USP9YP36-201ENST00000424581 829 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 NDUFB4P6-201ENST00000436819 366 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 RPS17P13-201ENST00000448974 407 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN1BQ07699 HMGB3P8-201ENST00000449709 577 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN1BQ07699 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN1BQ07699 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.41□□□□□ -1.86
SCN1BQ07699 AL049714.1-201ENST00000466686 347 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AC006463.2-201ENST00000473326 348 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
SCN1BQ07699 RPL30P14-201ENST00000482744 348 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 RN7SL604P-201ENST00000492589 296 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN1BQ07699 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SCN1BQ07699 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.41□□□□□ -1.86
SCN1BQ07699 PCBP2P3-201ENST00000509726 843 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AL359273.1-201ENST00000510918 627 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN1BQ07699 CDH12P4-201ENST00000517835 295 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 CDH12P3-201ENST00000517935 295 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 CDH12P1-201ENST00000518435 295 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AC105185.1-201ENST00000518705 535 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AC239860.2-201ENST00000525886 270 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AP003497.1-201ENST00000528472 562 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 OR5AP1P-201ENST00000529730 940 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SCN1BQ07699 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN1BQ07699 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN1BQ07699 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.41□□□□□ -1.86
SCN1BQ07699 AC087465.1-201ENST00000560574 245 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN1BQ07699 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN1BQ07699 AC034268.2-201ENST00000571784 482 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN1BQ07699 ZNF415P1-201ENST00000582279 1166 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 MIR5684-201ENST00000585074 65 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AC061975.8-201ENST00000587058 721 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN1BQ07699 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.41□□□□□ -1.86
SCN1BQ07699 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SCN1BQ07699 AC004067.1-201ENST00000608733 700 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 MIR6130-201ENST00000619419 109 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AC243312.2-201ENST00000623340 601 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AC009039.2-201ENST00000624524 529 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms