Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.23□□□□□ -1.89
CBX1P83916 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.23□□□□□ -1.89
CBX1P83916 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.23□□□□□ -1.89
CBX1P83916 AC087499.8-201ENST00000578406 226 ntBASIC3.23□□□□□ -1.89
CBX1P83916 MIR4697-201ENST00000582977 78 ntBASIC3.23□□□□□ -1.89
CBX1P83916 MIR5187-201ENST00000583479 76 ntBASIC3.23□□□□□ -1.89
CBX1P83916 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.23□□□□□ -1.89
CBX1P83916 AL356575.1-201ENST00000603008 283 ntBASIC3.23□□□□□ -1.89
CBX1P83916 AP001330.4-201ENST00000604350 154 ntBASIC3.23□□□□□ -1.89
CBX1P83916 AC010738.1-201ENST00000604970 987 ntBASIC3.23□□□□□ -1.89
CBX1P83916 BNIP3P19-201ENST00000605397 577 ntBASIC3.23□□□□□ -1.89
CBX1P83916 AC091946.2-201ENST00000606105 291 ntBASIC3.23□□□□□ -1.89
CBX1P83916 AL583856.2-201ENST00000606298 543 ntBASIC3.23□□□□□ -1.89
CBX1P83916 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.23□□□□□ -1.89
CBX1P83916 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.23□□□□□ -1.89
CBX1P83916 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.23□□□□□ -1.89
CBX1P83916 AC015967.1-201ENST00000619893 476 ntBASIC3.23□□□□□ -1.89
CBX1P83916 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.23□□□□□ -1.89
CBX1P83916 AC087821.2-201ENST00000637086 450 ntBASIC3.23□□□□□ -1.89
CBX1P83916 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CBX1P83916 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CBX1P83916 MTCO1P23-201ENST00000415223 1526 ntBASIC3.23□□□□□ -1.89
CBX1P83916 AP004289.2-201ENST00000444413 1457 ntBASIC3.22□□□□□ -1.89
CBX1P83916 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.22□□□□□ -1.89
CBX1P83916 OR5H2-201ENST00000355273 945 ntBASIC3.22□□□□□ -1.89
CBX1P83916 SNORA25.6-201ENST00000364121 118 ntBASIC3.22□□□□□ -1.89
CBX1P83916 RNA5SP283-201ENST00000365604 119 ntBASIC3.22□□□□□ -1.89
CBX1P83916 RNU6-1300P-201ENST00000391046 108 ntBASIC3.22□□□□□ -1.89
CBX1P83916 AL035405.1-201ENST00000400795 710 ntBASIC3.22□□□□□ -1.89
CBX1P83916 CYCSP45-201ENST00000402289 315 ntBASIC3.22□□□□□ -1.89
CBX1P83916 HMGN2P35-201ENST00000412164 270 ntBASIC3.22□□□□□ -1.89
CBX1P83916 AC109780.2-201ENST00000413467 845 ntBASIC3.22□□□□□ -1.89
CBX1P83916 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.22□□□□□ -1.89
CBX1P83916 MTND4LP10-201ENST00000435146 291 ntBASIC3.22□□□□□ -1.89
CBX1P83916 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.22□□□□□ -1.89
CBX1P83916 RPL23AP31-201ENST00000456160 467 ntBASIC3.22□□□□□ -1.89
CBX1P83916 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.22□□□□□ -1.89
CBX1P83916 KC877373.1-201ENST00000479066 408 ntBASIC3.22□□□□□ -1.89
CBX1P83916 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.22□□□□□ -1.89
CBX1P83916 AC006390.1-201ENST00000508068 283 ntBASIC3.22□□□□□ -1.89
CBX1P83916 AC027309.2-201ENST00000520566 192 ntBASIC3.22□□□□□ -1.89
CBX1P83916 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.22□□□□□ -1.89
CBX1P83916 AP000857.1-201ENST00000532151 543 ntBASIC3.22□□□□□ -1.89
CBX1P83916 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.22□□□□□ -1.89
CBX1P83916 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.22□□□□□ -1.89
CBX1P83916 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.22□□□□□ -1.89
CBX1P83916 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.22□□□□□ -1.89
CBX1P83916 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.22□□□□□ -1.89
CBX1P83916 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.22□□□□□ -1.89
CBX1P83916 MIR3670-2-201ENST00000582974 65 ntBASIC3.22□□□□□ -1.89
CBX1P83916 MIR3670-1-201ENST00000584160 65 ntBASIC3.22□□□□□ -1.89
CBX1P83916 MIR3670-3-201ENST00000584855 65 ntBASIC3.22□□□□□ -1.89
CBX1P83916 AL031985.2-201ENST00000600955 480 ntBASIC3.22□□□□□ -1.89
CBX1P83916 MIR3670-4-201ENST00000612260 65 ntBASIC3.22□□□□□ -1.89
CBX1P83916 AC083809.1-201ENST00000615051 472 ntBASIC3.22□□□□□ -1.89
CBX1P83916 AC109454.4-201ENST00000623411 649 ntBASIC3.22□□□□□ -1.89
CBX1P83916 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.22□□□□□ -1.89
CBX1P83916 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CBX1P83916 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.22□□□□□ -1.89
CBX1P83916 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CBX1P83916 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CBX1P83916 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CBX1P83916 SUGT1P1-201ENST00000379514 476 ntBASIC3.21□□□□□ -1.9
CBX1P83916 MIR30B-201ENST00000384850 88 ntBASIC3.21□□□□□ -1.9
CBX1P83916 ARF4P3-201ENST00000397387 509 ntBASIC3.21□□□□□ -1.9
CBX1P83916 AL139095.1-201ENST00000404326 391 ntBASIC3.21□□□□□ -1.9
CBX1P83916 RNA5SP317-201ENST00000410176 116 ntBASIC3.21□□□□□ -1.9
CBX1P83916 RNA5SP274-201ENST00000410484 108 ntBASIC3.21□□□□□ -1.9
CBX1P83916 RN7SKP263-201ENST00000411194 309 ntBASIC3.21□□□□□ -1.9
CBX1P83916 RNA5SP311-201ENST00000411290 116 ntBASIC3.21□□□□□ -1.9
CBX1P83916 RNA5SP492-201ENST00000411330 114 ntBASIC3.21□□□□□ -1.9
CBX1P83916 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.21□□□□□ -1.9
CBX1P83916 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.21□□□□□ -1.9
CBX1P83916 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.21□□□□□ -1.9
CBX1P83916 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.21□□□□□ -1.9
CBX1P83916 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.21□□□□□ -1.9
CBX1P83916 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
CBX1P83916 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.21□□□□□ -1.9
CBX1P83916 RPL17P49-201ENST00000443728 411 ntBASIC3.21□□□□□ -1.9
CBX1P83916 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CBX1P83916 AC008155.2-201ENST00000464337 397 ntBASIC3.21□□□□□ -1.9
CBX1P83916 ACTR3P3-201ENST00000480448 893 ntBASIC3.21□□□□□ -1.9
CBX1P83916 RN7SL20P-201ENST00000488827 297 ntBASIC3.21□□□□□ -1.9
CBX1P83916 HMGN1P11-201ENST00000508668 303 ntBASIC3.21□□□□□ -1.9
CBX1P83916 AC008837.1-201ENST00000511513 412 ntBASIC3.21□□□□□ -1.9
CBX1P83916 MTND5P4-201ENST00000514978 288 ntBASIC3.21□□□□□ -1.9
CBX1P83916 SNORA31.8-201ENST00000516327 108 ntBASIC3.21□□□□□ -1.9
CBX1P83916 RNA5SP315-201ENST00000516340 116 ntBASIC3.21□□□□□ -1.9
CBX1P83916 SCARNA13-201ENST00000516672 275 ntBASIC3.21□□□□□ -1.9
CBX1P83916 RNA5SP312-201ENST00000517068 116 ntBASIC3.21□□□□□ -1.9
CBX1P83916 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.21□□□□□ -1.9
CBX1P83916 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.21□□□□□ -1.9
CBX1P83916 AC008507.2-201ENST00000588402 1176 ntBASIC3.21□□□□□ -1.9
CBX1P83916 AL592148.2-201ENST00000612210 372 ntBASIC3.21□□□□□ -1.9
CBX1P83916 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CBX1P83916 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CBX1P83916 AL157770.1-201ENST00000623049 439 ntBASIC3.21□□□□□ -1.9
CBX1P83916 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.21□□□□□ -1.9
CBX1P83916 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.21□□□□□ -1.9
CBX1P83916 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms