Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 RNA5SP129-201ENST00000410276 118 ntBASIC2.05□□□□□ -2.08
ABCA4P78363 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.05□□□□□ -2.08
ABCA4P78363 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.05□□□□□ -2.08
ABCA4P78363 AC096638.1-201ENST00000444678 216 ntBASIC2.05□□□□□ -2.08
ABCA4P78363 MTCO3P11-201ENST00000455103 774 ntBASIC2.05□□□□□ -2.08
ABCA4P78363 TMEM248P1-201ENST00000510579 951 ntBASIC2.05□□□□□ -2.08
ABCA4P78363 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.05□□□□□ -2.08
ABCA4P78363 RN7SKP282-201ENST00000516824 299 ntBASIC2.05□□□□□ -2.08
ABCA4P78363 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.05□□□□□ -2.08
ABCA4P78363 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.05□□□□□ -2.08
ABCA4P78363 AC026464.5-201ENST00000562497 722 ntBASIC2.05□□□□□ -2.08
ABCA4P78363 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.05□□□□□ -2.08
ABCA4P78363 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
ABCA4P78363 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.05□□□□□ -2.08
ABCA4P78363 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.05□□□□□ -2.08
ABCA4P78363 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
ABCA4P78363 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.04□□□□□ -2.08
ABCA4P78363 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.04□□□□□ -2.08
ABCA4P78363 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
ABCA4P78363 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.04□□□□□ -2.08
ABCA4P78363 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.04□□□□□ -2.08
ABCA4P78363 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
ABCA4P78363 AL023284.1-201ENST00000403956 276 ntBASIC2.04□□□□□ -2.08
ABCA4P78363 RPS20P25-201ENST00000412447 352 ntBASIC2.04□□□□□ -2.08
ABCA4P78363 RPL7P10-201ENST00000417407 739 ntBASIC2.04□□□□□ -2.08
ABCA4P78363 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.04□□□□□ -2.08
ABCA4P78363 AL590399.6-201ENST00000446396 307 ntBASIC2.04□□□□□ -2.08
ABCA4P78363 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.04□□□□□ -2.08
ABCA4P78363 HMGB3P15-201ENST00000507326 574 ntBASIC2.04□□□□□ -2.08
ABCA4P78363 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ABCA4P78363 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.04□□□□□ -2.08
ABCA4P78363 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.04□□□□□ -2.08
ABCA4P78363 AC093331.1-201ENST00000521474 169 ntBASIC2.04□□□□□ -2.08
ABCA4P78363 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.04□□□□□ -2.08
ABCA4P78363 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.04□□□□□ -2.08
ABCA4P78363 AC084373.1-201ENST00000603311 235 ntBASIC2.04□□□□□ -2.08
ABCA4P78363 AL592494.3-201ENST00000609485 464 ntBASIC2.04□□□□□ -2.08
ABCA4P78363 AP003072.4-201ENST00000624580 310 ntBASIC2.04□□□□□ -2.08
ABCA4P78363 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
ABCA4P78363 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ABCA4P78363 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
ABCA4P78363 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
ABCA4P78363 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
ABCA4P78363 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ABCA4P78363 AC103988.1-201ENST00000566382 2177 ntBASIC2.04□□□□□ -2.08
ABCA4P78363 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ABCA4P78363 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ABCA4P78363 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ABCA4P78363 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
ABCA4P78363 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
ABCA4P78363 Y_RNA.164-201ENST00000363709 102 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 Y_RNA.338-201ENST00000365320 114 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
ABCA4P78363 SNORA64-201ENST00000384674 134 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 AL356806.1-201ENST00000422524 916 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 RPS24P8-201ENST00000431490 402 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 MRPL50P4-201ENST00000446432 475 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 ST13P20-201ENST00000447996 1065 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 AC012181.1-201ENST00000479895 423 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.03□□□□□ -2.08
ABCA4P78363 SEC11B-201ENST00000518383 499 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.03□□□□□ -2.08
ABCA4P78363 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.03□□□□□ -2.08
ABCA4P78363 AC067747.1-201ENST00000608026 250 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.03□□□□□ -2.08
ABCA4P78363 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ABCA4P78363 SNORA50A-202ENST00000629536 136 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 MTND5P27-201ENST00000428871 1720 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
ABCA4P78363 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ABCA4P78363 AC244033.1-201ENST00000426826 870 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 MTCYBP29-201ENST00000436327 1006 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 CFTRP1-201ENST00000456646 183 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 snoU13.18-201ENST00000459483 104 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 AL024509.2-201ENST00000493462 493 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.03□□□□□ -2.08
ABCA4P78363 OR5H4P-201ENST00000510851 923 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 RN7SKP219-201ENST00000516825 296 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.03□□□□□ -2.08
ABCA4P78363 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ABCA4P78363 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.03□□□□□ -2.08
ABCA4P78363 AC105036.1-201ENST00000566222 271 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 MTCO3P13-201ENST00000577757 781 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 AC011494.1-201ENST00000596454 237 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 CR589904.2-201ENST00000612533 440 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.03□□□□□ -2.08
ABCA4P78363 AC121761.2-201ENST00000617300 689 ntBASIC2.03□□□□□ -2.08
ABCA4P78363 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.03□□□□□ -2.08
ABCA4P78363 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
ABCA4P78363 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.03□□□□□ -2.09
ABCA4P78363 AC002543.1-201ENST00000299783 1954 ntBASIC2.03□□□□□ -2.09
ABCA4P78363 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.02□□□□□ -2.09
ABCA4P78363 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
ABCA4P78363 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.02□□□□□ -2.09
ABCA4P78363 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ABCA4P78363 U8.13-201ENST00000390842 128 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 AL591416.1-201ENST00000404015 867 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 AL162578.1-201ENST00000406202 378 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 AIMP1P1-201ENST00000418670 937 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms