Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.18□□□□□ -1.58
ERVFC1P60507 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.18□□□□□ -1.58
ERVFC1P60507 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.18□□□□□ -1.58
ERVFC1P60507 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.18□□□□□ -1.58
ERVFC1P60507 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.18□□□□□ -1.58
ERVFC1P60507 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.18□□□□□ -1.58
ERVFC1P60507 AC068993.1-201ENST00000546724 589 ntBASIC5.18□□□□□ -1.58
ERVFC1P60507 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.18□□□□□ -1.58
ERVFC1P60507 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.18□□□□□ -1.58
ERVFC1P60507 NDUFB4P11-201ENST00000560510 395 ntBASIC5.18□□□□□ -1.58
ERVFC1P60507 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.18□□□□□ -1.58
ERVFC1P60507 AL353997.4-201ENST00000586196 166 ntBASIC5.18□□□□□ -1.58
ERVFC1P60507 AC022726.1-201ENST00000587475 207 ntBASIC5.18□□□□□ -1.58
ERVFC1P60507 AC098848.2-201ENST00000588023 330 ntBASIC5.18□□□□□ -1.58
ERVFC1P60507 AL355598.1-201ENST00000604169 202 ntBASIC5.18□□□□□ -1.58
ERVFC1P60507 AL356218.2-201ENST00000605264 187 ntBASIC5.18□□□□□ -1.58
ERVFC1P60507 CTHRC1P1-201ENST00000605383 469 ntBASIC5.18□□□□□ -1.58
ERVFC1P60507 AC023813.4-201ENST00000607580 580 ntBASIC5.18□□□□□ -1.58
ERVFC1P60507 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.18□□□□□ -1.58
ERVFC1P60507 AL022401.1-201ENST00000619498 108 ntBASIC5.18□□□□□ -1.58
ERVFC1P60507 uc_338.22-201ENST00000622722 187 ntBASIC5.18□□□□□ -1.58
ERVFC1P60507 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.18□□□□□ -1.58
ERVFC1P60507 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ERVFC1P60507 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ERVFC1P60507 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
ERVFC1P60507 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
ERVFC1P60507 AC002525.1-201ENST00000624392 1622 ntBASIC5.18□□□□□ -1.58
ERVFC1P60507 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ERVFC1P60507 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.18□□□□□ -1.58
ERVFC1P60507 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ERVFC1P60507 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
ERVFC1P60507 ASNSP3-201ENST00000451989 1306 ntBASIC5.18□□□□□ -1.58
ERVFC1P60507 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ERVFC1P60507 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
ERVFC1P60507 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
ERVFC1P60507 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ERVFC1P60507 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ERVFC1P60507 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
ERVFC1P60507 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.17□□□□□ -1.58
ERVFC1P60507 PCAT14-202ENST00000627127 3935 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
ERVFC1P60507 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ERVFC1P60507 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERVFC1P60507 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERVFC1P60507 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ERVFC1P60507 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ERVFC1P60507 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
ERVFC1P60507 Y_RNA.31-201ENST00000362574 102 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 RNU6-984P-201ENST00000363236 109 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 Y_RNA.187-201ENST00000363918 113 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 RNU6-343P-201ENST00000364709 104 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 AC117470.1-201ENST00000381974 330 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 SNORA70.6-201ENST00000383934 134 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 MIR129-1-201ENST00000384972 72 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERVFC1P60507 MTCYBP4-201ENST00000401524 249 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 RNU4-26P-201ENST00000410270 107 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 AC008280.1-201ENST00000418851 412 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 RPEP3-201ENST00000425462 676 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.17□□□□□ -1.58
ERVFC1P60507 AL137792.2-201ENST00000443484 235 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.17□□□□□ -1.58
ERVFC1P60507 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.17□□□□□ -1.58
ERVFC1P60507 RPS20P32-201ENST00000456044 356 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 VN1R17P-201ENST00000472048 1090 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 AC083829.1-201ENST00000503756 657 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 AC091885.1-201ENST00000506658 268 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.17□□□□□ -1.58
ERVFC1P60507 MTCO2P24-201ENST00000515611 426 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 RNU6-202P-201ENST00000515998 96 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.17□□□□□ -1.58
ERVFC1P60507 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.17□□□□□ -1.58
ERVFC1P60507 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.17□□□□□ -1.58
ERVFC1P60507 VN1R84P-201ENST00000593697 235 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 AC008687.2-201ENST00000597865 520 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.17□□□□□ -1.58
ERVFC1P60507 BBIP1P1-201ENST00000602999 279 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 AC010424.2-201ENST00000607594 443 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 AC004908.2-201ENST00000609090 574 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 AL391813.2-201ENST00000609113 322 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERVFC1P60507 uc_338.15-201ENST00000615470 191 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 AL049794.2-201ENST00000616301 365 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERVFC1P60507 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.17□□□□□ -1.58
ERVFC1P60507 KPNA2P2-201ENST00000419546 1489 ntBASIC5.17□□□□□ -1.58
ERVFC1P60507 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ERVFC1P60507 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.17□□□□□ -1.58
ERVFC1P60507 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.17□□□□□ -1.58
ERVFC1P60507 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERVFC1P60507 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
ERVFC1P60507 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ERVFC1P60507 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.16□□□□□ -1.58
ERVFC1P60507 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ERVFC1P60507 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ERVFC1P60507 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.16□□□□□ -1.58
ERVFC1P60507 STX3-208ENST00000641815 3236 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ERVFC1P60507 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms