Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 OR7K1P-201ENST00000546439 926 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 ZNF321P-202ENST00000550843 495 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDL3P58872 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDL3P58872 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDL3P58872 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDL3P58872 AL022099.1-201ENST00000604551 712 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 AC012443.1-201ENST00000605605 231 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 AP002791.1-201ENST00000623291 381 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 AC079597.1-201ENST00000624306 508 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.64□□□□□ -1.67
RHBDL3P58872 AL773545.4-201ENST00000637262 310 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 AL513478.4-201ENST00000641636 310 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDL3P58872 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDL3P58872 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDL3P58872 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDL3P58872 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDL3P58872 AF127577.6-201ENST00000623352 2191 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDL3P58872 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RHBDL3P58872 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RHBDL3P58872 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.63□□□□□ -1.67
RHBDL3P58872 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RHBDL3P58872 AP001148.1-201ENST00000624124 2359 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.63□□□□□ -1.67
RHBDL3P58872 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RHBDL3P58872 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RHBDL3P58872 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RHBDL3P58872 RNU6-1207P-201ENST00000384343 107 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 MIR200C-201ENST00000384980 68 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 MIR199A2-201ENST00000385289 110 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.63□□□□□ -1.67
RHBDL3P58872 MTCO1P17-201ENST00000411522 491 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 AC093578.1-201ENST00000415219 368 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 MTND4P20-201ENST00000424125 869 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 AL591419.1-201ENST00000427423 339 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.63□□□□□ -1.67
RHBDL3P58872 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.63□□□□□ -1.67
RHBDL3P58872 UBE2V1P13-201ENST00000436983 439 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.63□□□□□ -1.67
RHBDL3P58872 AC069285.2-201ENST00000440210 275 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.63□□□□□ -1.67
RHBDL3P58872 RANP8-201ENST00000444720 713 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.63□□□□□ -1.67
RHBDL3P58872 snoU13.22-201ENST00000459428 104 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.63□□□□□ -1.67
RHBDL3P58872 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.63□□□□□ -1.67
RHBDL3P58872 AC022447.3-201ENST00000506865 495 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.63□□□□□ -1.67
RHBDL3P58872 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.63□□□□□ -1.67
RHBDL3P58872 RNU6-528P-201ENST00000516926 100 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.63□□□□□ -1.67
RHBDL3P58872 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.63□□□□□ -1.67
RHBDL3P58872 AL121834.1-201ENST00000572284 509 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.63□□□□□ -1.67
RHBDL3P58872 AP001330.4-201ENST00000604350 154 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 AC106791.2-201ENST00000604680 391 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 AC106028.5-201ENST00000610332 395 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 AC005344.1-201ENST00000613391 459 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 MIR6130-201ENST00000619419 109 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 MIR4275-201ENST00000636486 87 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 TAB3P1-202ENST00000452645 1634 ntBASIC4.63□□□□□ -1.67
RHBDL3P58872 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.63□□□□□ -1.67
RHBDL3P58872 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RHBDL3P58872 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RHBDL3P58872 AP004289.2-201ENST00000444413 1457 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RHBDL3P58872 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
RHBDL3P58872 AL672167.1-206ENST00000356293 943 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 MIR208A-201ENST00000362287 71 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 Y_RNA.302-201ENST00000364997 102 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RHBDL3P58872 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RHBDL3P58872 SNORA5A-201ENST00000384111 134 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 AC007066.1-201ENST00000392902 381 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.62□□□□□ -1.67
RHBDL3P58872 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.62□□□□□ -1.67
RHBDL3P58872 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.62□□□□□ -1.67
RHBDL3P58872 AC091286.1-201ENST00000431233 461 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.62□□□□□ -1.67
RHBDL3P58872 HMGB1P37-201ENST00000439613 609 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.62□□□□□ -1.67
RHBDL3P58872 AC010655.1-201ENST00000449336 292 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 RPL21P11-201ENST00000461458 483 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 AC078785.3-201ENST00000476607 425 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 RPL7P24-201ENST00000493052 752 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 AC017037.1-201ENST00000508460 471 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.62□□□□□ -1.67
RHBDL3P58872 AC017037.2-201ENST00000513850 890 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 AC034159.1-201ENST00000513885 583 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 RNU1-61P-201ENST00000516107 151 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 AC026403.1-201ENST00000518938 295 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.62□□□□□ -1.67
RHBDL3P58872 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RHBDL3P58872 AC087276.1-201ENST00000529659 480 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 AL391156.1-201ENST00000554965 554 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 MTND6P33-201ENST00000571794 183 ntBASIC4.62□□□□□ -1.67
RHBDL3P58872 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms