Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN20P56880 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN20P56880 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN20P56880 AL161781.1-201ENST00000354277 403 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 RNU5F-6P-201ENST00000362979 116 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 Y_RNA.97-201ENST00000363094 102 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 SNORD35B-201ENST00000363660 87 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 RNU5F-7P-201ENST00000363696 115 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 HMGN2P8-201ENST00000391458 268 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 MIR1183-201ENST00000408856 89 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 RN7SKP263-201ENST00000411194 309 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN20P56880 PGBD4P8-201ENST00000412993 562 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AC109780.2-201ENST00000413467 845 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN20P56880 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN20P56880 EZH2P1-201ENST00000431167 291 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN20P56880 RPL37P21-201ENST00000435890 276 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 RSU1P2-202ENST00000437884 485 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN20P56880 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN20P56880 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN20P56880 COX6CP12-201ENST00000446748 202 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN20P56880 RAP1BP2-201ENST00000478270 544 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AC068724.1-201ENST00000487100 792 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN20P56880 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN20P56880 TXNP6-201ENST00000510190 310 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AC091965.2-201ENST00000512324 613 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AC108064.1-201ENST00000513791 460 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AC093677.1-201ENST00000514414 678 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN20P56880 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN20P56880 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN20P56880 OR4R3P-201ENST00000525084 838 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.66□□□□□ -1.82
CLDN20P56880 OR6C73P-201ENST00000546432 358 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AC007115.1-201ENST00000546853 234 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AC009101.1-201ENST00000568135 242 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AC025627.2-201ENST00000576220 160 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AC090615.1-201ENST00000577519 154 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AC012417.1-201ENST00000582307 1039 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AC083760.1-201ENST00000589621 670 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AC073544.2-201ENST00000601155 540 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 PRELID3BP8-201ENST00000604148 295 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AC112230.1-201ENST00000604342 547 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN20P56880 AC064872.1-201ENST00000604823 1072 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AL451044.1-201ENST00000604867 238 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AL034351.1-201ENST00000605288 668 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN20P56880 AC006329.2-201ENST00000611491 394 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN20P56880 U7.8-201ENST00000619968 63 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN20P56880 AP005264.7-201ENST00000625003 745 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AC006378.2-201ENST00000623178 2476 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CLDN20P56880 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN20P56880 MTND5P3-201ENST00000438536 1800 ntBASIC3.65□□□□□ -1.82
CLDN20P56880 MTND4P4-201ENST00000439033 1366 ntBASIC3.65□□□□□ -1.82
CLDN20P56880 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
CLDN20P56880 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.65□□□□□ -1.82
CLDN20P56880 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.65□□□□□ -1.83
CLDN20P56880 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN20P56880 SNORA60-201ENST00000362396 134 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 RNU6-989P-201ENST00000362756 107 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 RNU4-24P-201ENST00000364565 139 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 RNU4-91P-201ENST00000364778 135 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN20P56880 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN20P56880 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CLDN20P56880 U8.14-201ENST00000390843 143 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 RNU6-821P-201ENST00000390995 107 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 RNU6-628P-201ENST00000410675 107 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 RNU4-6P-201ENST00000410804 122 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 MTCO1P17-201ENST00000411522 491 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN20P56880 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN20P56880 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN20P56880 AC006548.1-201ENST00000427470 102 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.65□□□□□ -1.83
CLDN20P56880 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.65□□□□□ -1.83
CLDN20P56880 THAP5P1-201ENST00000439089 262 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.65□□□□□ -1.83
CLDN20P56880 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN20P56880 RPL7P52-201ENST00000449200 742 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 AL445669.2-201ENST00000454425 421 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 SNRPGP9-201ENST00000456025 225 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 OR6K1P-201ENST00000456766 971 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 HMGB1P36-201ENST00000487709 576 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN20P56880 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN20P56880 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.65□□□□□ -1.83
CLDN20P56880 RNU6-27P-201ENST00000516146 107 ntBASIC3.65□□□□□ -1.83
CLDN20P56880 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.65□□□□□ -1.83
CLDN20P56880 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms