Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.41□□□□□ -1.7
COPAP53621 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COPAP53621 RPS3AP44-201ENST00000425466 790 ntBASIC4.41□□□□□ -1.7
COPAP53621 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COPAP53621 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.41□□□□□ -1.7
COPAP53621 RSU1P2-202ENST00000437884 485 ntBASIC4.41□□□□□ -1.7
COPAP53621 RPS24P1-201ENST00000438550 371 ntBASIC4.41□□□□□ -1.7
COPAP53621 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.41□□□□□ -1.7
COPAP53621 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.41□□□□□ -1.7
COPAP53621 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.41□□□□□ -1.7
COPAP53621 GDI2P2-201ENST00000445131 608 ntBASIC4.41□□□□□ -1.7
COPAP53621 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.41□□□□□ -1.7
COPAP53621 AP000542.1-201ENST00000448473 371 ntBASIC4.41□□□□□ -1.7
COPAP53621 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.41□□□□□ -1.7
COPAP53621 AP001086.1-201ENST00000494882 321 ntBASIC4.41□□□□□ -1.7
COPAP53621 AC104164.2-201ENST00000496953 495 ntBASIC4.41□□□□□ -1.7
COPAP53621 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.41□□□□□ -1.7
COPAP53621 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COPAP53621 RN7SKP116-201ENST00000516902 319 ntBASIC4.41□□□□□ -1.7
COPAP53621 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.41□□□□□ -1.7
COPAP53621 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.41□□□□□ -1.7
COPAP53621 AC090615.1-201ENST00000577519 154 ntBASIC4.41□□□□□ -1.7
COPAP53621 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.41□□□□□ -1.7
COPAP53621 AL139395.1-201ENST00000603662 160 ntBASIC4.41□□□□□ -1.7
COPAP53621 AC092354.2-201ENST00000607786 514 ntBASIC4.41□□□□□ -1.7
COPAP53621 AL031666.3-201ENST00000609320 1006 ntBASIC4.41□□□□□ -1.7
COPAP53621 AC006329.2-201ENST00000611491 394 ntBASIC4.41□□□□□ -1.7
COPAP53621 AC005332.10-201ENST00000612725 619 ntBASIC4.41□□□□□ -1.7
COPAP53621 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.41□□□□□ -1.7
COPAP53621 U73479.1-201ENST00000618062 168 ntBASIC4.41□□□□□ -1.7
COPAP53621 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.41□□□□□ -1.7
COPAP53621 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.41□□□□□ -1.7
COPAP53621 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.41□□□□□ -1.7
COPAP53621 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COPAP53621 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COPAP53621 NXPH1-205ENST00000602349 1953 ntBASIC4.41□□□□□ -1.7
COPAP53621 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COPAP53621 LARP1BP1-201ENST00000506036 1359 ntBASIC4.4□□□□□ -1.7
COPAP53621 MAPK10-372ENST00000641954 3413 ntBASIC4.4□□□□□ -1.7
COPAP53621 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COPAP53621 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
COPAP53621 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.4□□□□□ -1.7
COPAP53621 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
COPAP53621 RNA5SP388-201ENST00000362584 119 ntBASIC4.4□□□□□ -1.71
COPAP53621 RNU6-1042P-201ENST00000384204 107 ntBASIC4.4□□□□□ -1.71
COPAP53621 RNU6-809P-201ENST00000384461 107 ntBASIC4.4□□□□□ -1.71
COPAP53621 SNORA37-201ENST00000384504 129 ntBASIC4.4□□□□□ -1.71
COPAP53621 EI24P1-201ENST00000416584 867 ntBASIC4.4□□□□□ -1.71
COPAP53621 RPL23AP38-201ENST00000423801 469 ntBASIC4.4□□□□□ -1.71
COPAP53621 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.4□□□□□ -1.71
COPAP53621 AL445669.1-201ENST00000426743 755 ntBASIC4.4□□□□□ -1.71
COPAP53621 MTCYBP45-201ENST00000435243 565 ntBASIC4.4□□□□□ -1.71
COPAP53621 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.4□□□□□ -1.71
COPAP53621 PDSS1P2-201ENST00000449397 678 ntBASIC4.4□□□□□ -1.71
COPAP53621 MTND1P27-201ENST00000451117 902 ntBASIC4.4□□□□□ -1.71
COPAP53621 BTF3P5-201ENST00000457252 467 ntBASIC4.4□□□□□ -1.71
COPAP53621 RPS7P7-201ENST00000463499 571 ntBASIC4.4□□□□□ -1.71
COPAP53621 RPS4XP10-201ENST00000465034 731 ntBASIC4.4□□□□□ -1.71
COPAP53621 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.4□□□□□ -1.71
COPAP53621 TXNP6-201ENST00000510190 310 ntBASIC4.4□□□□□ -1.71
COPAP53621 TMEM248P1-201ENST00000510579 951 ntBASIC4.4□□□□□ -1.71
COPAP53621 NDUFB4P9-201ENST00000511646 388 ntBASIC4.4□□□□□ -1.71
COPAP53621 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.4□□□□□ -1.71
COPAP53621 FABP5P5-201ENST00000515537 406 ntBASIC4.4□□□□□ -1.71
COPAP53621 MIR2116-201ENST00000517221 80 ntBASIC4.4□□□□□ -1.71
COPAP53621 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.4□□□□□ -1.71
COPAP53621 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.4□□□□□ -1.71
COPAP53621 AP003385.6-201ENST00000531603 374 ntBASIC4.4□□□□□ -1.71
COPAP53621 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.4□□□□□ -1.71
COPAP53621 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.4□□□□□ -1.71
COPAP53621 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.4□□□□□ -1.71
COPAP53621 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.4□□□□□ -1.71
COPAP53621 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.4□□□□□ -1.71
COPAP53621 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.4□□□□□ -1.71
COPAP53621 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.4□□□□□ -1.71
COPAP53621 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COPAP53621 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.4□□□□□ -1.71
COPAP53621 AC005771.1-201ENST00000585581 349 ntBASIC4.4□□□□□ -1.71
COPAP53621 AL353997.4-201ENST00000586196 166 ntBASIC4.4□□□□□ -1.71
COPAP53621 AC025946.2-201ENST00000603398 234 ntBASIC4.4□□□□□ -1.71
COPAP53621 AL136363.2-201ENST00000604173 851 ntBASIC4.4□□□□□ -1.71
COPAP53621 AC112230.1-201ENST00000604342 547 ntBASIC4.4□□□□□ -1.71
COPAP53621 AL354984.3-201ENST00000604803 325 ntBASIC4.4□□□□□ -1.71
COPAP53621 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COPAP53621 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
COPAP53621 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.4□□□□□ -1.71
COPAP53621 AC040168.1-201ENST00000623594 991 ntBASIC4.4□□□□□ -1.71
COPAP53621 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.4□□□□□ -1.71
COPAP53621 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
COPAP53621 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
COPAP53621 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
COPAP53621 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.4□□□□□ -1.71
COPAP53621 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COPAP53621 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.4□□□□□ -1.71
COPAP53621 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.4□□□□□ -1.71
COPAP53621 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.4□□□□□ -1.71
COPAP53621 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COPAP53621 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COPAP53621 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.39□□□□□ -1.71
COPAP53621 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms