Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL022400.1-201ENST00000423946 935 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 AL035407.1-201ENST00000429211 571 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.01□□□□□ -1.77
CLCN3P51790 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.01□□□□□ -1.77
CLCN3P51790 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.01□□□□□ -1.77
CLCN3P51790 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.01□□□□□ -1.77
CLCN3P51790 AC133473.1-201ENST00000455173 299 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.01□□□□□ -1.77
CLCN3P51790 MTCO2P18-201ENST00000457151 658 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 SNORD105B-201ENST00000458770 79 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.01□□□□□ -1.77
CLCN3P51790 VWA8P1-201ENST00000510889 176 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 AC005798.1-201ENST00000513715 387 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 AL121766.1-201ENST00000547436 487 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLCN3P51790 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.01□□□□□ -1.77
CLCN3P51790 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.01□□□□□ -1.77
CLCN3P51790 CYCSP2-201ENST00000558168 301 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.01□□□□□ -1.77
CLCN3P51790 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.01□□□□□ -1.77
CLCN3P51790 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.01□□□□□ -1.77
CLCN3P51790 SRGNP1-201ENST00000603392 451 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 BRDTP1-201ENST00000605735 677 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.01□□□□□ -1.77
CLCN3P51790 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.01□□□□□ -1.77
CLCN3P51790 AC231657.1-201ENST00000624313 397 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.01□□□□□ -1.77
CLCN3P51790 BDP1P-201ENST00000582658 1990 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.01□□□□□ -1.77
CLCN3P51790 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLCN3P51790 AC012020.1-201ENST00000624541 1728 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLCN3P51790 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4□□□□□ -1.77
CLCN3P51790 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4□□□□□ -1.77
CLCN3P51790 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4□□□□□ -1.77
CLCN3P51790 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLCN3P51790 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CLCN3P51790 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLCN3P51790 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4□□□□□ -1.77
CLCN3P51790 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4□□□□□ -1.77
CLCN3P51790 AL356489.2-201ENST00000566968 3528 ntBASIC4□□□□□ -1.77
CLCN3P51790 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLCN3P51790 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLCN3P51790 RNA5SP502-201ENST00000362694 119 ntBASIC4□□□□□ -1.77
CLCN3P51790 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLCN3P51790 MIR490-201ENST00000384865 128 ntBASIC4□□□□□ -1.77
CLCN3P51790 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4□□□□□ -1.77
CLCN3P51790 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4□□□□□ -1.77
CLCN3P51790 RPS12P23-201ENST00000419579 400 ntBASIC4□□□□□ -1.77
CLCN3P51790 MTCYBP24-201ENST00000420387 1106 ntBASIC4□□□□□ -1.77
CLCN3P51790 AC005517.2-201ENST00000424673 553 ntBASIC4□□□□□ -1.77
CLCN3P51790 CYCSP4-201ENST00000429682 331 ntBASIC4□□□□□ -1.77
CLCN3P51790 AL159987.2-201ENST00000432754 307 ntBASIC4□□□□□ -1.77
CLCN3P51790 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4□□□□□ -1.77
CLCN3P51790 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4□□□□□ -1.77
CLCN3P51790 AC010655.1-201ENST00000449336 292 ntBASIC4□□□□□ -1.77
CLCN3P51790 RPL31P3-201ENST00000458430 332 ntBASIC4□□□□□ -1.77
CLCN3P51790 BZW1P2-201ENST00000473537 826 ntBASIC4□□□□□ -1.77
CLCN3P51790 AC069499.1-201ENST00000489433 509 ntBASIC4□□□□□ -1.77
CLCN3P51790 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4□□□□□ -1.77
CLCN3P51790 AC090453.1-201ENST00000495560 436 ntBASIC4□□□□□ -1.77
CLCN3P51790 AC093281.2-201ENST00000510153 597 ntBASIC4□□□□□ -1.77
CLCN3P51790 AC117532.1-201ENST00000514638 323 ntBASIC4□□□□□ -1.77
CLCN3P51790 RNU6-759P-201ENST00000516740 103 ntBASIC4□□□□□ -1.77
CLCN3P51790 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4□□□□□ -1.77
CLCN3P51790 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4□□□□□ -1.77
CLCN3P51790 AC007458.1-201ENST00000542812 373 ntBASIC4□□□□□ -1.77
CLCN3P51790 AC107016.1-201ENST00000550463 337 ntBASIC4□□□□□ -1.77
CLCN3P51790 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4□□□□□ -1.77
CLCN3P51790 LARP7P2-201ENST00000575306 125 ntBASIC4□□□□□ -1.77
CLCN3P51790 BNIP3P11-201ENST00000603878 563 ntBASIC4□□□□□ -1.77
CLCN3P51790 AC105129.3-201ENST00000605455 485 ntBASIC4□□□□□ -1.77
CLCN3P51790 AC135507.1-201ENST00000607214 561 ntBASIC4□□□□□ -1.77
CLCN3P51790 AC090116.1-201ENST00000615679 446 ntBASIC4□□□□□ -1.77
CLCN3P51790 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLCN3P51790 AC103858.2-201ENST00000621471 543 ntBASIC4□□□□□ -1.77
CLCN3P51790 AC244258.1-201ENST00000637553 1071 ntBASIC4□□□□□ -1.77
CLCN3P51790 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4□□□□□ -1.77
CLCN3P51790 AL445523.1-201ENST00000451184 1362 ntBASIC4□□□□□ -1.77
CLCN3P51790 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLCN3P51790 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CLCN3P51790 AC018555.1-201ENST00000567548 1980 ntBASIC4□□□□□ -1.77
CLCN3P51790 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.99□□□□□ -1.77
CLCN3P51790 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CLCN3P51790 ELL2P3-201ENST00000457883 1602 ntBASIC3.99□□□□□ -1.77
CLCN3P51790 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.99□□□□□ -1.77
CLCN3P51790 AL365440.1-201ENST00000436135 2167 ntBASIC3.99□□□□□ -1.77
CLCN3P51790 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.99□□□□□ -1.77
CLCN3P51790 RNU6-1279P-201ENST00000383917 103 ntBASIC3.99□□□□□ -1.77
CLCN3P51790 RNU6-1200P-201ENST00000384162 107 ntBASIC3.99□□□□□ -1.77
CLCN3P51790 RNU6-339P-201ENST00000384310 107 ntBASIC3.99□□□□□ -1.77
CLCN3P51790 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.99□□□□□ -1.77
CLCN3P51790 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLCN3P51790 AL590084.2-201ENST00000401481 382 ntBASIC3.99□□□□□ -1.77
CLCN3P51790 MTND4LP20-201ENST00000402379 270 ntBASIC3.99□□□□□ -1.77
CLCN3P51790 PIGPP2-201ENST00000411569 458 ntBASIC3.99□□□□□ -1.77
CLCN3P51790 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.99□□□□□ -1.77
CLCN3P51790 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.99□□□□□ -1.77
CLCN3P51790 AC012065.2-201ENST00000421295 375 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms