Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 U1.39-201ENST00000621562 146 ntBASIC2.98□□□□□ -1.93
RFX3P48380 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.98□□□□□ -1.93
RFX3P48380 BX649567.1-201ENST00000642071 1134 ntBASIC2.98□□□□□ -1.93
RFX3P48380 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RFX3P48380 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.98□□□□□ -1.93
RFX3P48380 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RFX3P48380 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RFX3P48380 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
RFX3P48380 ZNF807-201ENST00000328088 1707 ntBASIC2.97□□□□□ -1.93
RFX3P48380 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RFX3P48380 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
RFX3P48380 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
RFX3P48380 RNU6-251P-201ENST00000363235 104 ntBASIC2.97□□□□□ -1.93
RFX3P48380 U3.6-201ENST00000363622 211 ntBASIC2.97□□□□□ -1.93
RFX3P48380 RNVU1-14-201ENST00000384770 164 ntBASIC2.97□□□□□ -1.93
RFX3P48380 MIR483-201ENST00000385070 76 ntBASIC2.97□□□□□ -1.93
RFX3P48380 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
RFX3P48380 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.97□□□□□ -1.93
RFX3P48380 AL357075.1-201ENST00000404107 726 ntBASIC2.97□□□□□ -1.93
RFX3P48380 AC007899.1-201ENST00000412776 775 ntBASIC2.97□□□□□ -1.93
RFX3P48380 NDUFB4P5-201ENST00000415445 361 ntBASIC2.97□□□□□ -1.93
RFX3P48380 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.97□□□□□ -1.93
RFX3P48380 AC012498.1-201ENST00000424037 437 ntBASIC2.97□□□□□ -1.93
RFX3P48380 OR2AS1P-201ENST00000427827 319 ntBASIC2.97□□□□□ -1.93
RFX3P48380 DPPA2P1-201ENST00000428060 556 ntBASIC2.97□□□□□ -1.93
RFX3P48380 AC012497.1-201ENST00000429392 575 ntBASIC2.97□□□□□ -1.93
RFX3P48380 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.97□□□□□ -1.93
RFX3P48380 AC011242.1-201ENST00000433596 1158 ntBASIC2.97□□□□□ -1.93
RFX3P48380 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.97□□□□□ -1.93
RFX3P48380 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.97□□□□□ -1.93
RFX3P48380 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.97□□□□□ -1.93
RFX3P48380 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.97□□□□□ -1.93
RFX3P48380 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.97□□□□□ -1.93
RFX3P48380 AC006483.1-201ENST00000487308 313 ntBASIC2.97□□□□□ -1.93
RFX3P48380 RPL21P13-201ENST00000488305 481 ntBASIC2.97□□□□□ -1.93
RFX3P48380 AC093767.1-201ENST00000504523 156 ntBASIC2.97□□□□□ -1.93
RFX3P48380 HSPD1P15-201ENST00000505573 1122 ntBASIC2.97□□□□□ -1.93
RFX3P48380 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.97□□□□□ -1.93
RFX3P48380 RNA5SP217-201ENST00000515959 91 ntBASIC2.97□□□□□ -1.93
RFX3P48380 SCARNA20.6-201ENST00000517251 106 ntBASIC2.97□□□□□ -1.93
RFX3P48380 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.97□□□□□ -1.93
RFX3P48380 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.97□□□□□ -1.93
RFX3P48380 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.97□□□□□ -1.93
RFX3P48380 SNRPGP16-201ENST00000533275 226 ntBASIC2.97□□□□□ -1.93
RFX3P48380 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.97□□□□□ -1.93
RFX3P48380 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.97□□□□□ -1.93
RFX3P48380 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.97□□□□□ -1.93
RFX3P48380 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.97□□□□□ -1.93
RFX3P48380 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.97□□□□□ -1.93
RFX3P48380 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.97□□□□□ -1.93
RFX3P48380 AL606834.2-201ENST00000602954 668 ntBASIC2.97□□□□□ -1.93
RFX3P48380 AL133393.1-201ENST00000603277 287 ntBASIC2.97□□□□□ -1.93
RFX3P48380 AP001330.4-201ENST00000604350 154 ntBASIC2.97□□□□□ -1.93
RFX3P48380 AC073657.2-201ENST00000605661 303 ntBASIC2.97□□□□□ -1.93
RFX3P48380 AL158211.2-201ENST00000607282 395 ntBASIC2.97□□□□□ -1.93
RFX3P48380 VIS1.1-201ENST00000610517 203 ntBASIC2.97□□□□□ -1.93
RFX3P48380 VN1R74P-201ENST00000613259 503 ntBASIC2.97□□□□□ -1.93
RFX3P48380 uc_338.25-201ENST00000613756 156 ntBASIC2.97□□□□□ -1.93
RFX3P48380 AC009464.1-201ENST00000615731 469 ntBASIC2.97□□□□□ -1.93
RFX3P48380 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.97□□□□□ -1.93
RFX3P48380 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
RFX3P48380 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.97□□□□□ -1.93
RFX3P48380 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RFX3P48380 AC008264.2-201ENST00000610193 3731 ntBASIC2.97□□□□□ -1.93
RFX3P48380 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
RFX3P48380 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.97□□□□□ -1.93
RFX3P48380 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.96□□□□□ -1.93
RFX3P48380 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RFX3P48380 SGO1P2-201ENST00000429458 1589 ntBASIC2.96□□□□□ -1.94
RFX3P48380 AL049780.3-201ENST00000624612 1583 ntBASIC2.96□□□□□ -1.94
RFX3P48380 AL356274.2-201ENST00000624379 3752 ntBASIC2.96□□□□□ -1.94
RFX3P48380 MAPK10-362ENST00000641864 4484 ntBASIC2.96□□□□□ -1.94
RFX3P48380 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
RFX3P48380 SNORA63.3-201ENST00000362682 132 ntBASIC2.96□□□□□ -1.94
RFX3P48380 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RFX3P48380 RNU6-1074P-201ENST00000383995 104 ntBASIC2.96□□□□□ -1.94
RFX3P48380 SAR1AP2-201ENST00000392696 594 ntBASIC2.96□□□□□ -1.94
RFX3P48380 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.96□□□□□ -1.94
RFX3P48380 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX3P48380 RNA5SP229-201ENST00000410809 99 ntBASIC2.96□□□□□ -1.94
RFX3P48380 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.96□□□□□ -1.94
RFX3P48380 RPL32P35-201ENST00000415214 394 ntBASIC2.96□□□□□ -1.94
RFX3P48380 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX3P48380 AC005300.1-201ENST00000428401 373 ntBASIC2.96□□□□□ -1.94
RFX3P48380 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.96□□□□□ -1.94
RFX3P48380 UBE2V1P6-201ENST00000430840 422 ntBASIC2.96□□□□□ -1.94
RFX3P48380 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX3P48380 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.96□□□□□ -1.94
RFX3P48380 AC006028.1-201ENST00000438379 402 ntBASIC2.96□□□□□ -1.94
RFX3P48380 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX3P48380 AL645638.1-201ENST00000440519 361 ntBASIC2.96□□□□□ -1.94
RFX3P48380 RPL21P8-201ENST00000465083 535 ntBASIC2.96□□□□□ -1.94
RFX3P48380 RN7SL601P-201ENST00000471221 293 ntBASIC2.96□□□□□ -1.94
RFX3P48380 AC015908.1-201ENST00000478739 476 ntBASIC2.96□□□□□ -1.94
RFX3P48380 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX3P48380 AC026414.1-201ENST00000504046 698 ntBASIC2.96□□□□□ -1.94
RFX3P48380 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX3P48380 AC110794.1-201ENST00000505816 425 ntBASIC2.96□□□□□ -1.94
RFX3P48380 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RFX3P48380 RNA5SP135-201ENST00000517019 125 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms