Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-1P43699 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.33□□□□□ -1.88
NKX2-1P43699 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-1P43699 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.33□□□□□ -1.88
NKX2-1P43699 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-1P43699 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
NKX2-1P43699 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-1P43699 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-1P43699 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
NKX2-1P43699 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.33□□□□□ -1.88
NKX2-1P43699 Y_RNA.97-201ENST00000363094 102 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 U3.4-201ENST00000363352 213 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 RNU6-744P-201ENST00000365557 107 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 Y_RNA.436-201ENST00000384097 102 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 RNU6-1316P-201ENST00000384242 108 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 SNORD3H-201ENST00000384486 214 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 Y_RNA.553-201ENST00000384670 102 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 SNORD115.1-201ENST00000391109 76 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 HMGN2P8-201ENST00000391458 268 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 RPS3AP23-201ENST00000401762 784 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 MIR1251-201ENST00000408552 70 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 MTCO1P17-201ENST00000411522 491 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AMD1P2-201ENST00000412936 992 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 RPS7P13-201ENST00000413955 498 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 DUTP6-201ENST00000425573 462 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AL157831.1-201ENST00000426134 473 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AC068287.1-201ENST00000430283 295 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.33□□□□□ -1.88
NKX2-1P43699 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-1P43699 KCTD9P3-201ENST00000434597 1169 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-1P43699 RPS24P1-201ENST00000438550 371 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AC108734.1-201ENST00000439549 399 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AC073264.2-201ENST00000448886 166 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-1P43699 ZNF114P1-201ENST00000453500 292 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 MTCO3P20-201ENST00000454926 688 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 UBDP1-202ENST00000457888 382 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.33□□□□□ -1.88
NKX2-1P43699 RN7SL93P-201ENST00000463035 293 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 RPL21P104-201ENST00000464143 478 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 RPL21P126-201ENST00000470049 478 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 RPS4XP15-201ENST00000489210 795 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AP001025.2-201ENST00000490908 477 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 CBX3P3-201ENST00000508108 532 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 Y_RNA.695-201ENST00000516715 107 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 RNU7-143P-201ENST00000516781 65 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AC103783.1-201ENST00000520506 373 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-1P43699 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-1P43699 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.33□□□□□ -1.88
NKX2-1P43699 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AC023161.2-201ENST00000551218 780 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AC087481.2-201ENST00000565492 330 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AC012417.1-201ENST00000582307 1039 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AL451086.1-201ENST00000605596 223 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 RN7SKP299-201ENST00000606679 301 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AC097468.3-201ENST00000607956 456 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AC023043.4-201ENST00000612081 449 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 HULC.1-201ENST00000612720 240 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AC100827.5-201ENST00000615883 426 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AL360181.4-201ENST00000621752 134 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.33□□□□□ -1.88
NKX2-1P43699 MIR6730-201ENST00000622213 67 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AL161637.1-201ENST00000622380 412 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AC025048.6-202ENST00000627667 438 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AC092192.1-201ENST00000633154 1018 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.33□□□□□ -1.88
NKX2-1P43699 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.33□□□□□ -1.88
NKX2-1P43699 OR56B2P-202ENST00000641377 2453 ntBASIC3.33□□□□□ -1.88
NKX2-1P43699 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.33□□□□□ -1.88
NKX2-1P43699 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-1P43699 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-1P43699 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.32□□□□□ -1.88
NKX2-1P43699 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-1P43699 UBE3AP2-201ENST00000429033 2259 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-1P43699 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
NKX2-1P43699 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-1P43699 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-1P43699 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-1P43699 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms