Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RPL12P50-201ENST00000603116 116 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 AC103881.1-201ENST00000603476 538 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 AC090116.1-201ENST00000615679 446 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
TNFSF9P41273 AP006248.3-201ENST00000623580 594 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 AC106730.3-201ENST00000624568 641 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
TNFSF9P41273 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TNFSF9P41273 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.03□□□□□ -1.92
TNFSF9P41273 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TNFSF9P41273 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
TNFSF9P41273 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
TNFSF9P41273 AC021755.1-201ENST00000559747 1447 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 AC008432.1-201ENST00000615912 1320 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 RNU6-339P-201ENST00000384310 107 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TNFSF9P41273 RNU4-27P-201ENST00000410889 139 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 AL451074.5-201ENST00000415894 435 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 AL009174.1-201ENST00000426577 416 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFSF9P41273 MTCYBP31-201ENST00000438855 1122 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.03□□□□□ -1.92
TNFSF9P41273 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFSF9P41273 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFSF9P41273 MTND2P30-201ENST00000456663 382 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 RNU7-170P-201ENST00000459303 61 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.03□□□□□ -1.92
TNFSF9P41273 RPS27AP1-201ENST00000475545 471 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 AC012181.1-201ENST00000479895 423 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFSF9P41273 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.03□□□□□ -1.92
TNFSF9P41273 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.03□□□□□ -1.92
TNFSF9P41273 RPL12P22-201ENST00000519073 490 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 COX6CP8-201ENST00000522620 226 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.03□□□□□ -1.92
TNFSF9P41273 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFSF9P41273 AC074051.3-201ENST00000570238 358 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFSF9P41273 MIR4672-201ENST00000583126 81 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFSF9P41273 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.03□□□□□ -1.92
TNFSF9P41273 AC090115.4-201ENST00000609970 188 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 AC006111.3-201ENST00000622137 383 ntBASIC3.03□□□□□ -1.92
TNFSF9P41273 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.03□□□□□ -1.92
TNFSF9P41273 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TNFSF9P41273 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
TNFSF9P41273 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
TNFSF9P41273 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
TNFSF9P41273 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TNFSF9P41273 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TNFSF9P41273 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TNFSF9P41273 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TNFSF9P41273 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TNFSF9P41273 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.02□□□□□ -1.93
TNFSF9P41273 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TNFSF9P41273 RNA5SP258-201ENST00000362750 119 ntBASIC3.02□□□□□ -1.93
TNFSF9P41273 RAD23BP2-201ENST00000416003 1207 ntBASIC3.02□□□□□ -1.93
TNFSF9P41273 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFSF9P41273 AC073508.1-201ENST00000428866 656 ntBASIC3.02□□□□□ -1.93
TNFSF9P41273 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.02□□□□□ -1.93
TNFSF9P41273 SSXP4-201ENST00000451349 245 ntBASIC3.02□□□□□ -1.93
TNFSF9P41273 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFSF9P41273 RPL21P8-201ENST00000465083 535 ntBASIC3.02□□□□□ -1.93
TNFSF9P41273 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TNFSF9P41273 OR8K4P-201ENST00000534608 872 ntBASIC3.02□□□□□ -1.93
TNFSF9P41273 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.02□□□□□ -1.93
TNFSF9P41273 HPRT1P3-201ENST00000539521 576 ntBASIC3.02□□□□□ -1.93
TNFSF9P41273 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.02□□□□□ -1.93
TNFSF9P41273 AL020997.3-201ENST00000602843 359 ntBASIC3.02□□□□□ -1.93
TNFSF9P41273 XIAPP1-201ENST00000603162 600 ntBASIC3.02□□□□□ -1.93
TNFSF9P41273 AC096947.1-201ENST00000603233 470 ntBASIC3.02□□□□□ -1.93
TNFSF9P41273 DPRXP5-201ENST00000604662 539 ntBASIC3.02□□□□□ -1.93
TNFSF9P41273 ATP1B3P1-201ENST00000605365 821 ntBASIC3.02□□□□□ -1.93
TNFSF9P41273 AL450489.1-201ENST00000612071 468 ntBASIC3.02□□□□□ -1.93
TNFSF9P41273 AC092628.2-201ENST00000622492 339 ntBASIC3.02□□□□□ -1.93
TNFSF9P41273 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.02□□□□□ -1.93
TNFSF9P41273 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TNFSF9P41273 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TNFSF9P41273 AC004925.1-201ENST00000624256 2706 ntBASIC3.02□□□□□ -1.93
TNFSF9P41273 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
TNFSF9P41273 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.02□□□□□ -1.93
TNFSF9P41273 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TNFSF9P41273 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TNFSF9P41273 MTND5P31-201ENST00000419366 1374 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 AC073055.1-201ENST00000456901 1621 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TNFSF9P41273 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TNFSF9P41273 RPL9P7-201ENST00000330965 580 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 MIR16-2-201ENST00000362117 81 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 RNU6-989P-201ENST00000362756 107 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
TNFSF9P41273 AL357078.2-201ENST00000416486 427 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.01□□□□□ -1.93
TNFSF9P41273 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.01□□□□□ -1.93
TNFSF9P41273 RPL7P55-201ENST00000450522 746 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms