Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.11□□□□□ -1.91
BRCA1P38398 TRIM60P13-201ENST00000432350 1283 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.11□□□□□ -1.91
BRCA1P38398 HMGB1P48-201ENST00000446155 598 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.11□□□□□ -1.91
BRCA1P38398 AC008885.2-201ENST00000509506 930 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 SNORA31.13-201ENST00000516624 135 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 AC100870.1-201ENST00000522035 505 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 C1DP5-201ENST00000525775 383 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.11□□□□□ -1.91
BRCA1P38398 AC012414.2-201ENST00000559474 187 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 AGGF1P8-201ENST00000562979 1000 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 AC006270.2-201ENST00000578523 652 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.11□□□□□ -1.91
BRCA1P38398 AL162233.1-201ENST00000620014 944 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRCA1P38398 AC011978.2-201ENST00000569835 2054 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 MAPK10-373ENST00000641983 6772 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRCA1P38398 MTND5P28-201ENST00000438005 1594 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
BRCA1P38398 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.11□□□□□ -1.91
BRCA1P38398 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRCA1P38398 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.11□□□□□ -1.91
BRCA1P38398 PTP4A1P5-201ENST00000420305 455 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 AC092832.1-201ENST00000422934 400 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.11□□□□□ -1.91
BRCA1P38398 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.11□□□□□ -1.91
BRCA1P38398 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.11□□□□□ -1.91
BRCA1P38398 AC087385.1-201ENST00000475062 312 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 OR9N1P-202ENST00000494289 481 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.11□□□□□ -1.91
BRCA1P38398 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.11□□□□□ -1.91
BRCA1P38398 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.11□□□□□ -1.91
BRCA1P38398 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.11□□□□□ -1.91
BRCA1P38398 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.11□□□□□ -1.91
BRCA1P38398 AADACP1-206ENST00000561502 1193 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.11□□□□□ -1.91
BRCA1P38398 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.11□□□□□ -1.91
BRCA1P38398 AC009318.2-201ENST00000610917 651 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRCA1P38398 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
BRCA1P38398 PISRT1-201ENST00000626175 531 ntBASIC3.11□□□□□ -1.91
BRCA1P38398 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRCA1P38398 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
BRCA1P38398 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
BRCA1P38398 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRCA1P38398 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
BRCA1P38398 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BRCA1P38398 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
BRCA1P38398 AL159169.1-201ENST00000421119 127 ntBASIC3.1□□□□□ -1.91
BRCA1P38398 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BRCA1P38398 RPS20P5-201ENST00000434808 360 ntBASIC3.1□□□□□ -1.91
BRCA1P38398 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.1□□□□□ -1.91
BRCA1P38398 snoU13.7-201ENST00000459220 104 ntBASIC3.1□□□□□ -1.91
BRCA1P38398 AP000873.1-201ENST00000463987 400 ntBASIC3.1□□□□□ -1.91
BRCA1P38398 RPS27AP9-201ENST00000477681 438 ntBASIC3.1□□□□□ -1.91
BRCA1P38398 CKS1BP2-201ENST00000497342 240 ntBASIC3.1□□□□□ -1.91
BRCA1P38398 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.1□□□□□ -1.91
BRCA1P38398 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.1□□□□□ -1.91
BRCA1P38398 AC118282.1-201ENST00000506408 765 ntBASIC3.1□□□□□ -1.91
BRCA1P38398 AC119751.1-201ENST00000513357 765 ntBASIC3.1□□□□□ -1.91
BRCA1P38398 AC245166.1-201ENST00000521012 253 ntBASIC3.1□□□□□ -1.91
BRCA1P38398 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.1□□□□□ -1.91
BRCA1P38398 BX322635.1-201ENST00000605804 496 ntBASIC3.1□□□□□ -1.91
BRCA1P38398 AC012467.1-201ENST00000607740 256 ntBASIC3.1□□□□□ -1.91
BRCA1P38398 AC073569.3-201ENST00000619055 682 ntBASIC3.1□□□□□ -1.91
BRCA1P38398 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
BRCA1P38398 AC117529.2-201ENST00000512159 2068 ntBASIC3.1□□□□□ -1.91
BRCA1P38398 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.1□□□□□ -1.91
BRCA1P38398 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
BRCA1P38398 AC107081.3-201ENST00000612715 2034 ntBASIC3.1□□□□□ -1.91
BRCA1P38398 ZNF542P-204ENST00000482727 1305 ntBASIC3.1□□□□□ -1.91
BRCA1P38398 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
BRCA1P38398 RNA5SP383-201ENST00000362934 120 ntBASIC3.09□□□□□ -1.91
BRCA1P38398 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
BRCA1P38398 RNU2-17P-201ENST00000410290 190 ntBASIC3.09□□□□□ -1.91
BRCA1P38398 PRELID3BP11-201ENST00000414230 479 ntBASIC3.09□□□□□ -1.91
BRCA1P38398 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
BRCA1P38398 TPTE2P6-202ENST00000445572 1007 ntBASIC3.09□□□□□ -1.91
BRCA1P38398 RPL21P41-201ENST00000459863 264 ntBASIC3.09□□□□□ -1.91
BRCA1P38398 RPL9P6-201ENST00000492764 598 ntBASIC3.09□□□□□ -1.91
BRCA1P38398 AC068305.1-201ENST00000497406 726 ntBASIC3.09□□□□□ -1.91
BRCA1P38398 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.09□□□□□ -1.91
BRCA1P38398 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
BRCA1P38398 RN7SKP31-201ENST00000516354 278 ntBASIC3.09□□□□□ -1.91
BRCA1P38398 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
BRCA1P38398 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.09□□□□□ -1.91
BRCA1P38398 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.09□□□□□ -1.91
BRCA1P38398 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.09□□□□□ -1.91
BRCA1P38398 HPRT1P3-201ENST00000539521 576 ntBASIC3.09□□□□□ -1.91
BRCA1P38398 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.09□□□□□ -1.91
BRCA1P38398 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.09□□□□□ -1.91
BRCA1P38398 AC010620.2-201ENST00000600135 313 ntBASIC3.09□□□□□ -1.91
BRCA1P38398 AC083899.3-201ENST00000603413 594 ntBASIC3.09□□□□□ -1.91
BRCA1P38398 LLPHP1-201ENST00000603571 367 ntBASIC3.09□□□□□ -1.91
BRCA1P38398 AC008277.2-201ENST00000605196 797 ntBASIC3.09□□□□□ -1.91
BRCA1P38398 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
BRCA1P38398 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.09□□□□□ -1.91
BRCA1P38398 AC066616.2-201ENST00000559334 1481 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms