Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.96□□□□□ -2.1
SNCAP37840 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SNCAP37840 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.96□□□□□ -2.1
SNCAP37840 CR383656.14-201ENST00000551951 406 ntBASIC1.96□□□□□ -2.1
SNCAP37840 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC1.96□□□□□ -2.1
SNCAP37840 AC103810.1-201ENST00000579873 453 ntBASIC1.96□□□□□ -2.1
SNCAP37840 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.96□□□□□ -2.1
SNCAP37840 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.96□□□□□ -2.1
SNCAP37840 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.96□□□□□ -2.1
SNCAP37840 AC069304.3-201ENST00000603938 1084 ntBASIC1.96□□□□□ -2.1
SNCAP37840 AC008083.4-201ENST00000615076 444 ntBASIC1.96□□□□□ -2.1
SNCAP37840 AL359693.1-201ENST00000614959 2407 ntBASIC1.96□□□□□ -2.1
SNCAP37840 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.96□□□□□ -2.1
SNCAP37840 AC135776.4-201ENST00000624300 1904 ntBASIC1.95□□□□□ -2.1
SNCAP37840 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SNCAP37840 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.95□□□□□ -2.1
SNCAP37840 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SNCAP37840 RNA5SP37-201ENST00000365420 130 ntBASIC1.95□□□□□ -2.1
SNCAP37840 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
SNCAP37840 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SNCAP37840 RNU4-52P-201ENST00000384209 138 ntBASIC1.95□□□□□ -2.1
SNCAP37840 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SNCAP37840 AC007064.1-201ENST00000412238 351 ntBASIC1.95□□□□□ -2.1
SNCAP37840 AL451062.2-201ENST00000427515 271 ntBASIC1.95□□□□□ -2.1
SNCAP37840 UBE2V1P6-201ENST00000430840 422 ntBASIC1.95□□□□□ -2.1
SNCAP37840 RPS24P8-201ENST00000431490 402 ntBASIC1.95□□□□□ -2.1
SNCAP37840 ATP5F1P1-201ENST00000433775 569 ntBASIC1.95□□□□□ -2.1
SNCAP37840 AP000936.2-201ENST00000447151 681 ntBASIC1.95□□□□□ -2.1
SNCAP37840 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.95□□□□□ -2.1
SNCAP37840 AC079804.2-201ENST00000490376 200 ntBASIC1.95□□□□□ -2.1
SNCAP37840 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SNCAP37840 AC080014.1-201ENST00000496877 1201 ntBASIC1.95□□□□□ -2.1
SNCAP37840 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.95□□□□□ -2.1
SNCAP37840 AC002456.2-201ENST00000509356 380 ntBASIC1.95□□□□□ -2.1
SNCAP37840 AC034159.1-201ENST00000513885 583 ntBASIC1.95□□□□□ -2.1
SNCAP37840 RN7SKP24-201ENST00000515888 284 ntBASIC1.95□□□□□ -2.1
SNCAP37840 OR5AK3P-201ENST00000527486 1297 ntBASIC1.95□□□□□ -2.1
SNCAP37840 AP003385.6-201ENST00000531603 374 ntBASIC1.95□□□□□ -2.1
SNCAP37840 AC025423.2-201ENST00000537570 439 ntBASIC1.95□□□□□ -2.1
SNCAP37840 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.95□□□□□ -2.1
SNCAP37840 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.95□□□□□ -2.1
SNCAP37840 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.95□□□□□ -2.1
SNCAP37840 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.95□□□□□ -2.1
SNCAP37840 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC1.95□□□□□ -2.1
SNCAP37840 AC112503.2-201ENST00000609005 552 ntBASIC1.95□□□□□ -2.1
SNCAP37840 AL590282.1-201ENST00000610379 1136 ntBASIC1.95□□□□□ -2.1
SNCAP37840 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SNCAP37840 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SNCAP37840 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.94□□□□□ -2.1
SNCAP37840 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SNCAP37840 AL596028.1-201ENST00000326971 197 ntBASIC1.94□□□□□ -2.1
SNCAP37840 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
SNCAP37840 MIR196B-201ENST00000384852 84 ntBASIC1.94□□□□□ -2.1
SNCAP37840 AC240504.1-201ENST00000395709 845 ntBASIC1.94□□□□□ -2.1
SNCAP37840 SNORA81-201ENST00000408493 178 ntBASIC1.94□□□□□ -2.1
SNCAP37840 HMGB3P2-201ENST00000411913 584 ntBASIC1.94□□□□□ -2.1
SNCAP37840 AL158825.1-201ENST00000414735 521 ntBASIC1.94□□□□□ -2.1
SNCAP37840 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.94□□□□□ -2.1
SNCAP37840 AC063976.3-201ENST00000426849 329 ntBASIC1.94□□□□□ -2.1
SNCAP37840 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.94□□□□□ -2.1
SNCAP37840 RPS3AP12-201ENST00000443616 753 ntBASIC1.94□□□□□ -2.1
SNCAP37840 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.94□□□□□ -2.1
SNCAP37840 AC011753.1-201ENST00000451001 220 ntBASIC1.94□□□□□ -2.1
SNCAP37840 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.94□□□□□ -2.1
SNCAP37840 AC104115.2-201ENST00000523026 687 ntBASIC1.94□□□□□ -2.1
SNCAP37840 AC109635.4-202ENST00000531666 412 ntBASIC1.94□□□□□ -2.1
SNCAP37840 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.94□□□□□ -2.1
SNCAP37840 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC1.94□□□□□ -2.1
SNCAP37840 SNORD53-201ENST00000579969 78 ntBASIC1.94□□□□□ -2.1
SNCAP37840 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
SNCAP37840 AC245036.5-201ENST00000596330 847 ntBASIC1.94□□□□□ -2.1
SNCAP37840 VN1R78P-201ENST00000597393 564 ntBASIC1.94□□□□□ -2.1
SNCAP37840 AL035413.2-201ENST00000604801 525 ntBASIC1.94□□□□□ -2.1
SNCAP37840 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SNCAP37840 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.94□□□□□ -2.1
SNCAP37840 MIR4496-201ENST00000635896 61 ntBASIC1.94□□□□□ -2.1
SNCAP37840 AC099654.7-201ENST00000635788 2127 ntBASIC1.94□□□□□ -2.1
SNCAP37840 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SNCAP37840 MTND4P1-201ENST00000457501 1466 ntBASIC1.94□□□□□ -2.1
SNCAP37840 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SNCAP37840 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SNCAP37840 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SNCAP37840 MTCYBP7-201ENST00000419540 1134 ntBASIC1.93□□□□□ -2.1
SNCAP37840 AC019097.1-201ENST00000424783 735 ntBASIC1.93□□□□□ -2.1
SNCAP37840 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SNCAP37840 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
SNCAP37840 SNRPEP4-201ENST00000435815 279 ntBASIC1.93□□□□□ -2.1
SNCAP37840 AC000041.1-201ENST00000439655 175 ntBASIC1.93□□□□□ -2.1
SNCAP37840 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.93□□□□□ -2.1
SNCAP37840 Z99714.1-201ENST00000450463 807 ntBASIC1.93□□□□□ -2.1
SNCAP37840 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.93□□□□□ -2.1
SNCAP37840 AP002345.1-201ENST00000456493 928 ntBASIC1.93□□□□□ -2.1
SNCAP37840 RBM43P1-201ENST00000476891 1081 ntBASIC1.93□□□□□ -2.1
SNCAP37840 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.93□□□□□ -2.1
SNCAP37840 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.93□□□□□ -2.1
SNCAP37840 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.93□□□□□ -2.1
SNCAP37840 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.93□□□□□ -2.1
SNCAP37840 AC026801.2-201ENST00000515352 425 ntBASIC1.93□□□□□ -2.1
SNCAP37840 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.93□□□□□ -2.1
SNCAP37840 ATP1B3P1-201ENST00000605365 821 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms